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1AC0
Asym. Unit
Info
Asym.Unit (42 KB)
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(1)
Title
:
GLUCOAMYLASE, GRANULAR STARCH-BINDING DOMAIN COMPLEX WITH CYCLODEXTRIN, NMR, MINIMIZED AVERAGE STRUCTURE
Authors
:
K. Sorimachi, M. -F. Le Gal-Coeffet, G. Williamson, D. B. Archer, M. P. Williamson
Date
:
10 Feb 97 (Deposition) - 07 Jul 97 (Release) - 19 May 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A
Keywords
:
Hydrolase, Starch Binding Domain
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Sorimachi, M. F. Le Gal-Coeffet, G. Williamson, D. B. Archer, M. P. Williamson
Solution Structure Of The Granular Starch Binding Domain Of Aspergillus Niger Glucoamylase Bound To Beta-Cyclodextrin.
Structure V. 5 647 1997
(for further references see the
PDB file header
)
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Hetero Components
(3, 14)
Info
All Hetero Components
1a: BETA-D-GLUCOSE (BGCa)
1b: BETA-D-GLUCOSE (BGCb)
2a: ALPHA-D-GLUCOSE (GLCa)
2b: ALPHA-D-GLUCOSE (GLCb)
2c: ALPHA-D-GLUCOSE (GLCc)
2d: ALPHA-D-GLUCOSE (GLCd)
2e: ALPHA-D-GLUCOSE (GLCe)
2f: ALPHA-D-GLUCOSE (GLCf)
2g: ALPHA-D-GLUCOSE (GLCg)
2h: ALPHA-D-GLUCOSE (GLCh)
2i: ALPHA-D-GLUCOSE (GLCi)
2j: ALPHA-D-GLUCOSE (GLCj)
2k: ALPHA-D-GLUCOSE (GLCk)
3a: D-GLUCOSE IN LINEAR FORM (GLOa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
BGC
2
Ligand/Ion
BETA-D-GLUCOSE
2
GLC
11
Ligand/Ion
ALPHA-D-GLUCOSE
3
GLO
1
Ligand/Ion
D-GLUCOSE IN LINEAR FORM
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
BGC A:2 , GLC A:7 , TRP A:590
BINDING SITE FOR RESIDUE GLC A 1
02
AC2
SOFTWARE
GLC A:1 , GLC A:3 , TRP A:543 , GLU A:544 , THR A:545 , TRP A:590
BINDING SITE FOR RESIDUE BGC A 2
03
AC3
SOFTWARE
BGC A:2 , GLC A:4 , TRP A:543 , GLU A:544
BINDING SITE FOR RESIDUE GLC A 3
04
AC4
SOFTWARE
GLC A:3 , BGC A:5
BINDING SITE FOR RESIDUE GLC A 4
05
AC5
SOFTWARE
GLC A:4 , GLO A:6 , SER A:536 , TRP A:543
BINDING SITE FOR RESIDUE BGC A 5
06
AC6
SOFTWARE
BGC A:5 , GLC A:7 , TRP A:543
BINDING SITE FOR RESIDUE GLO A 6
07
AC7
SOFTWARE
GLC A:1 , GLO A:6
BINDING SITE FOR RESIDUE GLC A 7
08
AC8
SOFTWARE
TYR A:556 , THR A:557 , SER A:558 , PRO A:561 , LEU A:562 , GLC A:618B , GLC A:623B
BINDING SITE FOR RESIDUE GLC A 617B
09
AC9
SOFTWARE
GLC A:617B , GLC A:619B , GLC A:620B , GLC A:623B
BINDING SITE FOR RESIDUE GLC A 618B
10
BC1
SOFTWARE
GLC A:618B , GLC A:620B , GLC A:621B , GLC A:622B
BINDING SITE FOR RESIDUE GLC A 619B
11
BC2
SOFTWARE
TYR A:527 , SER A:558 , GLC A:618B , GLC A:619B , GLC A:621B
BINDING SITE FOR RESIDUE GLC A 620B
12
BC3
SOFTWARE
GLC A:619B , GLC A:620B , GLC A:622B
BINDING SITE FOR RESIDUE GLC A 621B
13
BC4
SOFTWARE
GLC A:619B , GLC A:621B , GLC A:623B
BINDING SITE FOR RESIDUE GLC A 622B
14
BC5
SOFTWARE
ALA A:523 , TYR A:556 , PRO A:561 , LEU A:562 , GLC A:617B , GLC A:618B , GLC A:622B
BINDING SITE FOR RESIDUE GLC A 623B
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: CBM20 (A:509-616,A:509-616)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CBM20
PS51166
CBM20 (carbohydrate binding type-20) domain profile.
AMYG_ASPAW
533-640
1
A:509-616
AMYG_ASPNG
533-640
1
A:509-616
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1ac0a_ (A:)
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(
)
Folds
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)
(
)
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)
(
)
Families
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Prealbumin-like
(433)
Superfamily
:
Starch-binding domain-like
(84)
Family
:
Starch-binding domain
(67)
Protein domain
:
Glucoamylase, granular starch-binding domain
(4)
Aspergillus niger [TaxId: 5061]
(4)
1a
d1ac0a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1ac0A00 (A:509-616)
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Organisms
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)
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Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
Aspergillus niger. Organism_taxid: 5061. Strain: ab4.1.
(2)
1a
1ac0A00
A:509-616
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Pfam Domains
(0, 0)
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all PFAM domains
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Protein & NOT Site
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Chain A
Asymmetric Unit 1
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