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4F2N
Asym. Unit
Info
Asym.Unit (865 KB)
Biol.Unit 1 (148 KB)
Biol.Unit 2 (147 KB)
Biol.Unit 3 (148 KB)
Biol.Unit 4 (147 KB)
Biol.Unit 5 (146 KB)
Biol.Unit 6 (145 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF IRON SUPEROXIDE DISMUTASE FROM LEISHMANIA MAJOR
Authors
:
Seattle Structural Genomics Center For Infectious Disease (S
Date
:
08 May 12 (Deposition) - 16 May 12 (Release) - 03 Jun 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.85
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Biol. Unit 5: I,J (1x)
Biol. Unit 6: K,L (1x)
Keywords
:
Ssgcid, Nih, Niaid, Sbri, Emerald Biostructures, Structural Genomics, National Institute Of Allergy And Infectious Diseases, Seattle Structural Genomics Center For Infectious Disease, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
I. Q. Phan, D. R. Davies, N. S. Moretti, D. Shanmugam, I. Cestari, A. Anupama, J. W. Fairman, T. E. Edwards, K. Stuart, S. Schenkman, P. J. Myler
Iron Superoxide Dismutases In Eukaryotic Pathogens: New Insights From Apicomplexa And Trypanosoma Structures.
Acta Crystallogr F Struct V. 71 615 2015 Biol Commun
[
close entry info
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Hetero Components
(1, 12)
Info
All Hetero Components
1a: FE (II) ION (FE2a)
1b: FE (II) ION (FE2b)
1c: FE (II) ION (FE2c)
1d: FE (II) ION (FE2d)
1e: FE (II) ION (FE2e)
1f: FE (II) ION (FE2f)
1g: FE (II) ION (FE2g)
1h: FE (II) ION (FE2h)
1i: FE (II) ION (FE2i)
1j: FE (II) ION (FE2j)
1k: FE (II) ION (FE2k)
1l: FE (II) ION (FE2l)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FE2
12
Ligand/Ion
FE (II) ION
[
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:58 , HIS A:108 , ASP A:191 , HIS A:195 , HOH A:401
BINDING SITE FOR RESIDUE FE2 A 300
02
AC2
SOFTWARE
HIS B:58 , HIS B:108 , ASP B:191 , HIS B:195 , HOH B:483
BINDING SITE FOR RESIDUE FE2 B 300
03
AC3
SOFTWARE
HIS C:58 , HIS C:108 , ASP C:191 , HIS C:195 , HOH C:402
BINDING SITE FOR RESIDUE FE2 C 300
04
AC4
SOFTWARE
HIS D:58 , HIS D:108 , ASP D:191 , HIS D:195 , HOH D:401
BINDING SITE FOR RESIDUE FE2 D 300
05
AC5
SOFTWARE
HIS E:58 , HIS E:108 , ASP E:191 , HIS E:195 , HOH E:401
BINDING SITE FOR RESIDUE FE2 E 300
06
AC6
SOFTWARE
HIS F:58 , HIS F:108 , ASP F:191 , HIS F:195 , HOH F:435
BINDING SITE FOR RESIDUE FE2 F 300
07
AC7
SOFTWARE
HIS G:58 , HIS G:108 , ASP G:191 , HIS G:195 , HOH G:459
BINDING SITE FOR RESIDUE FE2 G 300
08
AC8
SOFTWARE
HIS H:58 , HIS H:108 , ASP H:191 , HIS H:195 , HOH H:401
BINDING SITE FOR RESIDUE FE2 H 300
09
AC9
SOFTWARE
HIS I:58 , HIS I:108 , ASP I:191 , HIS I:195 , HOH I:401
BINDING SITE FOR RESIDUE FE2 I 300
10
BC1
SOFTWARE
HIS J:58 , HIS J:108 , ASP J:191 , HIS J:195 , HOH J:404
BINDING SITE FOR RESIDUE FE2 J 300
11
BC2
SOFTWARE
HIS K:58 , HIS K:108 , ASP K:191 , HIS K:195 , HOH K:428
BINDING SITE FOR RESIDUE FE2 K 300
12
BC3
SOFTWARE
HIS L:58 , HIS L:108 , ASP L:191 , HIS L:195 , HOH L:432
BINDING SITE FOR RESIDUE FE2 L 300
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 24)
Info
All SCOP Domains
1a: SCOP_d4f2na1 (A:22-117)
1b: SCOP_d4f2nb1 (B:21-117)
1c: SCOP_d4f2nk1 (K:22-117)
1d: SCOP_d4f2nl1 (L:22-117)
1e: SCOP_d4f2nc1 (C:22-117)
1f: SCOP_d4f2nd1 (D:21-117)
1g: SCOP_d4f2ne1 (E:22-117)
1h: SCOP_d4f2nf1 (F:21-117)
1i: SCOP_d4f2ng1 (G:22-117)
1j: SCOP_d4f2nh1 (H:21-117)
1k: SCOP_d4f2ni1 (I:22-117)
1l: SCOP_d4f2nj1 (J:21-117)
2a: SCOP_d4f2na2 (A:118-230)
2b: SCOP_d4f2nb2 (B:118-230)
2c: SCOP_d4f2nk2 (K:118-230)
2d: SCOP_d4f2nl2 (L:118-230)
2e: SCOP_d4f2nc2 (C:118-230)
2f: SCOP_d4f2nd2 (D:118-230)
2g: SCOP_d4f2ne2 (E:118-230)
2h: SCOP_d4f2nf2 (F:118-230)
2i: SCOP_d4f2ng2 (G:118-230)
2j: SCOP_d4f2nh2 (H:118-230)
2k: SCOP_d4f2ni2 (I:118-230)
2l: SCOP_d4f2nj2 (J:118-230)
View:
Select:
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Long alpha-hairpin
(315)
Superfamily
:
Fe,Mn superoxide dismutase (SOD), N-terminal domain
(122)
Family
:
automated matches
(42)
Protein domain
:
automated matches
(42)
Leishmania major [TaxId: 5664]
(1)
1a
d4f2na1
A:22-117
1b
d4f2nb1
B:21-117
1c
d4f2nk1
K:22-117
1d
d4f2nl1
L:22-117
1e
d4f2nc1
C:22-117
1f
d4f2nd1
D:21-117
1g
d4f2ne1
E:22-117
1h
d4f2nf1
F:21-117
1i
d4f2ng1
G:22-117
1j
d4f2nh1
H:21-117
1k
d4f2ni1
I:22-117
1l
d4f2nj1
J:21-117
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Fe,Mn superoxide dismutase (SOD), C-terminal domain
(122)
Superfamily
:
Fe,Mn superoxide dismutase (SOD), C-terminal domain
(122)
Family
:
automated matches
(40)
Protein domain
:
automated matches
(40)
Leishmania major [TaxId: 5664]
(1)
2a
d4f2na2
A:118-230
2b
d4f2nb2
B:118-230
2c
d4f2nk2
K:118-230
2d
d4f2nl2
L:118-230
2e
d4f2nc2
C:118-230
2f
d4f2nd2
D:118-230
2g
d4f2ne2
E:118-230
2h
d4f2nf2
F:118-230
2i
d4f2ng2
G:118-230
2j
d4f2nh2
H:118-230
2k
d4f2ni2
I:118-230
2l
d4f2nj2
J:118-230
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Label:
Sorry, no Info available
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Asymmetric Unit 1
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select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
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Asym.Unit (865 KB)
Header - Asym.Unit
Biol.Unit 1 (148 KB)
Header - Biol.Unit 1
Biol.Unit 2 (147 KB)
Header - Biol.Unit 2
Biol.Unit 3 (148 KB)
Header - Biol.Unit 3
Biol.Unit 4 (147 KB)
Header - Biol.Unit 4
Biol.Unit 5 (146 KB)
Header - Biol.Unit 5
Biol.Unit 6 (145 KB)
Header - Biol.Unit 6
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