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3I90
Biol. Unit 2
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Asym.Unit (28 KB)
Biol.Unit 1 (12 KB)
Biol.Unit 2 (12 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN CHROMOBOX HOMOLOG 6 (CBX6) WITH H3K27 PEPTIDE
Authors
:
M. F. Amaya, M. Ravichandran, P. Loppnau, I. Kozieradzki, A. M. Edwards C. H. Arrowsmith, J. Weigelt, C. Bountra, A. Bochkarev, J. Min, H. Ouya Structural Genomics Consortium (Sgc)
Date
:
10 Jul 09 (Deposition) - 08 Sep 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
Chromobox Homolog 6, Cbx6, H3K27 Peptide, Structural Genomics, Structural Genomics Consortium, Sgc, Chromatin Regulator, Nucleus, Phosphoprotein, Repressor, Transcription, Transcription Regulation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Kaustov, H. Ouyang, M. Amaya, A. Lemak, N. Nady, S. Duan, G. A. Wasney Z. Li, M. Vedadi, M. Schapira, J. Min, C. H. Arrowsmith
Recognition And Specificity Determinants Of The Human Cbx Chromodomains.
J. Biol. Chem. V. 286 521 2011
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Hetero Components
(1, 1)
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1a: N-TRIMETHYLLYSINE (M3La)
1b: N-TRIMETHYLLYSINE (M3Lb)
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No.
Name
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Type
Full Name
1
M3L
1
Mod. Amino Acid
N-TRIMETHYLLYSINE
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Sites
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PROSITE Patterns/Profiles
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1: CHROMO_2 (B:11-59)
2: CHROMO_1 (B:28-48)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CHROMO_2
PS50013
Chromo and chromo shadow domain profile.
CBX6_HUMAN
11-69
1
-
B:11-59
2
CHROMO_1
PS00598
Chromo domain signature.
CBX6_HUMAN
28-48
1
-
B:28-48
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SCOP Domains
(1, 2)
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1a: SCOP_d3i90a_ (A:)
1b: SCOP_d3i90b_ (B:)
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All beta proteins
(24004)
Fold
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SH3-like barrel
(1035)
Superfamily
:
Chromo domain-like
(82)
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Chromo domain
(41)
Protein domain
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automated matches
(12)
Human (Homo sapiens) [TaxId: 9606]
(11)
1a
d3i90a_
A:
1b
d3i90b_
B:
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CATH Domains
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1a: CATH_3i90A00 (A:9-58)
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Class
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Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
OB fold (Dihydrolipoamide Acetyltransferase, E2P)
(1040)
Homologous Superfamily
:
[code=2.40.50.40, no name defined]
(161)
Human (Homo sapiens)
(86)
1a
3i90A00
A:9-58
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Asymmetric Unit 1
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Asym.Unit (28 KB)
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