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Class: All beta proteins (24004)
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Fold: SH3-like barrel (1035)
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Superfamily: Chromo domain-like (82)
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Family: automated matches (10)
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Protein domain: automated matches (10)
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Fruit fly (Drosophila melanogaster) [TaxId: 7227] (3)
2LRQA:CHEMICAL SHIFT ASSIGNMENT AND SOLUTION STRUCTURE OF FR822A FROM DROSOPHILA MELANOGASTER. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET FR822A
3M9QA:; B:DROSOPHILA MSL3 CHROMODOMAIN
3P7JA:; B:DROSOPHILA HP1A CHROMO SHADOW DOMAIN
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Human (Homo sapiens) [TaxId: 9606] (7)
2K1BA:SOLUTION NMR STRUCTURE OF THE CHROMO DOMAIN OF THE CHROMOBOX PROTEIN HOMOLOG 7
3LWEA:; B:THE CRYSTAL STRUCTURE OF MPP8
3MTSA:; B:; C:CHROMO DOMAIN OF HUMAN HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H1
3OB9A:; B:; C:; D:; E:STRUCTURE OF THE HUMAN MSL3 CHROMO-BARREL DOMAIN AT 2.5 ANGSTROM RESOLUTION
3QO2A:; B:; C:; D:STRUCTURAL INSIGHTS FOR MPP8 CHROMODOMAIN INTERACTION WITH HISTONE H3 LYSINE 9
3R93A:; B:; C:; D:CRYSTAL STRUCTURE OF THE CHROMO DOMAIN OF M-PHASE PHOSPHOPROTEIN 8 BOUND TO H3K9ME3 PEPTIDE
3SVMA:HUMAN MPP8 - HUMAN DNMT3AK47ME2 PEPTIDE
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Family: Chromo barrel domain (5)
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Protein domain: automated matches (2)
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Human (Homo sapiens) [TaxId: 9606] (2)
2EFIA:SOLUTION STRUCTURE OF THE CHROMO DOMAIN OF MORTALITY FACTOR 4-LIKE PROTEIN 1 FROM HUMAN
2F5KB:; C:; D:; E:; F:CRYSTAL STRUCTURE OF THE CHROMO DOMAIN OF HUMAN MRG15
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Protein domain: Mortality factor 4-like protein 1, MRG15 (1)
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Human (Homo sapiens) [TaxId: 9606] (1)
2F5KA:6-88CRYSTAL STRUCTURE OF THE CHROMO DOMAIN OF HUMAN MRG15
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Protein domain: Probable histone acetyltransferase MYST1 (1)
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Mouse (Mus musculus) [TaxId: 10090] (1)
1WGSA:SOLUTION STRUCTURE OF THE TUDOR DOMAIN FROM MOUSE HYPOTHETICAL PROTEIN HOMOLOGOUS TO HISTONE ACETYLTRANSFERASE
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Protein domain: Putative histone acetyltransferase MOF (1)
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Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
2BUDA:367-454THE SOLUTION STRUCTURE OF THE CHROMO BARREL DOMAIN FROM THE MALES-ABSENT ON THE FIRST (MOF) PROTEIN
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Family: Chromo domain (41)
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Protein domain: ATP-dependent helicase CHD1 (Chromo domain protein 1) (7)
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)
2DY7A:172-252SOLUTION STRUCTURE OF THE FIRST CHROMODOMAIN OF YEAST CHD1
2DY8A:279-347SOLUTION STRUCTURE OF THE SECOND CHROMODOMAIN OF YEAST CHD1
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Human (Homo sapiens) [TaxId: 9606] (5)
2B2TA:11-107; A:109-186; B:11-107; B:109-186; C:12-97TANDEM CHROMODOMAINS OF HUMAN CHD1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING TRIMETHYLLYSINE 4 AND PHOSPHOTHREONINE 3
2B2UA:108-187; A:13-107; B:108-185; B:13-107; C:13-97TANDEM CHROMODOMAINS OF HUMAN CHD1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING TRIMETHYLLYSINE 4 AND DIMETHYLARGININE 2
2B2VA:108-186; A:13-107; B:108-185; B:13-107; C:13-97CRYSTAL STRUCTURE ANALYSIS OF HUMAN CHD1 CHROMODOMAINS 1 AND 2 BOUND TO HISTONE H3 RESI 1-15 MEK4
2B2WA:108-187; A:13-107; B:108-186; B:13-107; C:12-96TANDEM CHROMODOMAINS OF HUMAN CHD1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING TRIMETHYLLYSINE 4
2B2YA:108-187; A:12-107; B:108-186; B:11-107; C:TANDEM CHROMODOMAINS OF HUMAN CHD1
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Protein domain: automated matches (12)
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Human (Homo sapiens) [TaxId: 9606] (11)
2D9UA:SOLUTION STRUCTURE OF THE CHROMO DOMAIN OF CHROMOBOX HOMOLOG 2 FROM HUMAN
2K28A:SOLUTION NMR STRUCTURE OF THE CHROMO DOMAIN OF THE CHROMOBOX PROTEIN HOMOLOG 4
3GV6A:CRYSTAL STRUCTURE OF HUMAN CHROMOBOX HOMOLOG 6 (CBX6) WITH H3K9 PEPTIDE
3H91A:; B:CRYSTAL STRUCTURE OF THE COMPLEX OF HUMAN CHROMOBOX HOMOLOG 2 (CBX2) AND H3K27 PEPTIDE
3I3CA:; B:; C:; D:CRYSTAL STRUCTURAL OF CBX5 CHROMO SHADOW DOMAIN
3I8ZA:CRYSTAL STRUCTURE OF HUMAN CHROMOBOX HOMOLOG 4 (CBX4)
3I90A:; B:CRYSTAL STRUCTURE OF HUMAN CHROMOBOX HOMOLOG 6 (CBX6) WITH H3K27 PEPTIDE
3I91A:; B:CRYSTAL STRUCTURE OF HUMAN CHROMOBOX HOMOLOG 8 (CBX8) WITH H3K9 PEPTIDE
3KUPA:; D:; B:; C:CRYSTAL STRUCTURE OF THE CBX3 CHROMO SHADOW DOMAIN
3TZDA:CRYSTAL STRUCTURE OF THE COMPLEX OF HUMAN CHROMOBOX HOMOLOG 3 (CBX3)
4HAEA:CRYSTAL STRUCTURE OF THE CDYL2-CHROMODOMAIN
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Mouse (Mus musculus) [TaxId: 10090] (1)
2KVMA:SOLUTION STRUCTURE OF THE CBX7 CHROMODOMAIN IN COMPLEX WITH A H3K27ME2 PEPTIDE
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Protein domain: Chromobox protein homolog 8 (1)
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Mouse (Mus musculus) [TaxId: 10090] (1)
2DNVA:8-58SOLUTION STRUCTURE OF RSGI RUH-055, A CHROMO DOMAIN FROM MUS MUSCULUS CDNA
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Protein domain: Chromodomain protein, Y-like isoform (1)
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Human (Homo sapiens) [TaxId: 9606] (1)
2DNTA:8-73SOLUTION STRUCTURE OF RSGI RUH-064, A CHROMO DOMAIN FROM HUMAN CDNA
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Protein domain: CpSRP43 (6)
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Thale cress (Arabidopsis thaliana) [TaxId: 3702] (6)
1X32A:3-47THREE DIMENSIONAL SOLUTION STRUCTURE OF THE CHROMO1 DOMAIN OF CPSRP43
1X3PA:1-543D SOLUTION STRUCTURE OF THE CHROMO-3 DOMAIN OF CPSRP43
1X3QA:3-573D SOLUTION STRUCTURE OF THE CHROMO-2 DOMAIN OF CPSRP43
2HUGA:3D SOLUTION STRUCTURE OF THE CHROMO-2 DOMAIN OF CPSRP43 COMPLEXED WITH CPSRP54 PEPTIDE
3DEOA:85-128STRUCTURAL BASIS FOR SPECIFIC SUBSTRATE RECOGNITION BY THE CHLOROPLAST SIGNAL RECOGNITION PARTICLE PROTEIN CPSRP43
3DEPA:85-128STRUCTURAL BASIS FOR SPECIFIC SUBSTRATE RECOGNITION BY THE CHLOROPLAST SIGNAL RECOGNITION PARTICLE PROTEIN CPSRP43
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Protein domain: Heterochromatin protein 1, HP1 (11)
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Fission yeast (Schizosaccharomyces pombe), SWI6 [TaxId: 4896] (1)
1E0BA:; B:CHROMO SHADOW DOMAIN FROM FISSION YEAST SWI6 PROTEIN.
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Fruit fly (Drosophila melanogaster) [TaxId: 7227] (3)
1KNAA:CHROMO DOMAIN OF HP1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING DIMETHYLLYSINE 9.
1KNEA:CHROMO DOMAIN OF HP1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING TRIMETHYLLYSINE 9
1Q3LA:CHROMODOMAIN OF HP1 COMPLEXED WITH HISTONE H3 TAIL CONTAINING MONOMETHYLLYSINE 9.
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Human (Homo sapiens) [TaxId: 9606] (3)
2FMMA:; B:; C:; D:CRYSTAL STRUCTURE OF EMSY-HP1 COMPLEX
3F2UA:CRYSTAL STRUCTURE OF HUMAN CHROMOBOX HOMOLOG 1 (CBX1)
3Q6SA:; B:; C:; D:THE CRYSTAL STRUCTURE OF THE HETEROCHROMATIN PROTEIN 1 BETA CHROMOSHADOW DOMAIN COMPLEXED WITH A PEPTIDE FROM SHUGOSHIN 1
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Mouse (Mus musculus), HP1 beta (MOD1, M31) [TaxId: 10090] (4)
1AP0A:STRUCTURE OF THE CHROMATIN BINDING (CHROMO) DOMAIN FROM MOUSE MODIFIER PROTEIN 1, NMR, 26 STRUCTURES
1DZ1A:; B:MOUSE HP1 (M31) C TERMINAL (SHADOW CHROMO) DOMAIN
1GUWA:STRUCTURE OF THE CHROMODOMAIN FROM MOUSE HP1BETA IN COMPLEX WITH THE LYSINE 9-METHYL HISTONE H3 N-TERMINAL PEPTIDE, NMR, 25 STRUCTURES
1S4ZA:; B:HP1 CHROMO SHADOW DOMAIN IN COMPLEX WITH PXVXL MOTIF OF CAF-1
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Protein domain: Histone methyltransferase clr4, chromo domain (1)
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Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] (1)
1G6ZA:SOLUTION STRUCTURE OF THE CLR4 CHROMO DOMAIN
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Protein domain: Polycomb protein, Pc (2)
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Fruit fly (Drosophila melanogaster) [TaxId: 7227] (2)
1PDQA:POLYCOMB CHROMODOMAIN COMPLEXED WITH THE HISTONE H3 TAIL CONTAINING TRIMETHYLLYSINE 27.
1PFBA:STRUCTURAL BASIS FOR SPECIFIC BINDING OF POLYCOMB CHROMODOMAIN TO HISTONE H3 METHYLATED AT K27
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Family: Histone-like proteins from archaea (26)
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Protein domain: automated matches (11)
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Sulfolobus acidocaldarius [TaxId: 2285] (11)
1WTOA:HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D DOUBLE MUTANT V26F/M29F IN COMPLEX WITH DNA GCGATCGC
1WTPA:; B:HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT M29F IN COMPLEX WITH DNA GCGA(UBR)CGC
1WTQA:HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT M29F IN COMPLEX WITH DNA GTAATTAC
1WTRA:HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT M29A IN COMPLEX WITH DNA GCGATCGC
1WTVA:HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT M29A IN COMPLEX WITH DNA GTAATTAC
1WTWA:HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT V26A IN COMPLEX WITH DNA GCGATCGC
1WTXA:HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT V26A IN COMPLEX WITH DNA GTAATTAC
1WVLA:; B:CRYSTAL STRUCTURE OF MULTIMERIC DNA-BINDING PROTEIN SAC7D-GCN4 WITH DNA DECAMER
1XX8A:NMR STRUCTURE OF THE W24A MUTANT OF THE HYPERTHERMOPHILE SAC7D PROTEIN
1XYIA:HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D DOUBLE MUTANT VAL26ALA/MET29ALA IN COMPLEX WITH DNA GCGATCGC
2XIWA:; B:CRYSTAL STRUCTURE OF THE SAC7D-DERIVED IGG1-BINDER C3-C24S
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Protein domain: DNA-binding protein (15)
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Sulfolobus acidocaldarius, Sac7d [TaxId: 2285] (8)
1AZPA:HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX
1AZQA:HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX
1BNZA:SSO7D HYPERTHERMOPHILE PROTEIN/DNA COMPLEX
1CA5A:INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA
1CA6A:INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA
1SAPA:HYPERTHERMOPHILE PROTEIN, RELAXATION MATRIX REFINEMENT STRUCTURE
1WD0A:CRYSTAL STRUCTURES OF THE HYPERTHERMOPHILIC CHROMOSOMAL PROTEIN SAC7D IN COMPLEX WITH DNA DECAMERS
1WD1A:CRYSTAL STRUCTURES OF THE HYPERTHERMOPHILIC CHROMOSOMAL PROTEIN SAC7D IN COMPLEX WITH DNA DECAMERS
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Sulfolobus solfataricus, Sso7d [TaxId: 2287] (7)
1B4OA:NMR STUDY OF SSO7D MUTANT (F31A) MINIMIZED AVERAGE STRUCTURE
1BBXC:; D:NON-SPECIFIC PROTEIN-DNA INTERACTIONS IN THE SSO7D-DNA COMPLEX, NMR, 1 STRUCTURE
1BF4A:CHROMOSOMAL DNA-BINDING PROTEIN SSO7D/D(GCGAACGC) COMPLEX
1C8CA:CRYSTAL STRUCTURES OF THE CHROMOSOMAL PROTEINS SSO7D/SAC7D BOUND TO DNA CONTAINING T-G MISMATCHED BASE PAIRS
1JICA:SOLUTION NMR STRUCTURE OF RECOMBINANT SSO7D WITH RNASE ACTIVITY, MINIMIZED AVERAGE STRUCTURE
1SSOA:SOLUTION STRUCTURE AND DNA-BINDING PROPERTIES OF A THERMOSTABLE PROTEIN FROM THE ARCHAEON SULFOLOBUS SOLFATARICUS
2CVRA:NMR SOLUTION STRUCTURE OF SSO7D MUTANT, K12L, 12 CONFORMERS