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2ZOY
Asym. Unit
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Asym.Unit (67 KB)
Biol.Unit 1 (63 KB)
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(1)
Title
:
THE MULTI-DRUG BINDING TRANSCRIPTIONAL REPRESSOR CGMR (CGL2612 PROTEIN) FROM C.GLUTAMICUM
Authors
:
H. Itou, M. Yao, N. Watanabe, I. Tanaka
Date
:
20 Jun 08 (Deposition) - 08 Jul 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Helix Turn Helix, Dna-Binding, Transcription, Transcription Regulation, Gene Regulation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Itou, U. Okada, H. Suzuki, M. Yao, M. Wachi, N. Watanabe, I. Tanaka
The Cgl2612 Protein From Corynebacterium Glutamicum Is A Drug Resistance-Related Transcriptional Repressor: Structural And Functional Analysis Of A Newly Identified Transcription Factor From Genomic Dna Analysis
J. Biol. Chem. V. 280 38711 2005
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
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No.
Name
Count
Type
Full Name
1
GOL
4
Ligand/Ion
GLYCEROL
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TRP A:63 , GLU A:66 , THR A:87 , GLU A:96 , PHE A:147 , HOH A:199 , HOH A:266
BINDING SITE FOR RESIDUE GOL A 186
2
AC2
SOFTWARE
ILE A:152 , HIS A:153 , TRP B:63 , LEU B:88 , LEU B:100 , TRP B:113 , ASN B:117 , GLN B:140 , ASP B:144
BINDING SITE FOR RESIDUE GOL A 187
3
AC3
SOFTWARE
TRP B:63 , GLU B:66 , THR B:87 , GLU B:90 , GLU B:96 , HOH B:197 , HOH B:208 , HOH B:260 , HOH B:266
BINDING SITE FOR RESIDUE GOL B 186
4
AC4
SOFTWARE
TRP A:63 , LEU A:100 , ASP A:144 , ILE B:152 , HIS B:153 , HOH B:288
BINDING SITE FOR RESIDUE GOL B 187
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d2zoya1 (A:1-74)
1b: SCOP_d2zoyb1 (B:3-74)
2a: SCOP_d2zoya2 (A:75-175)
2b: SCOP_d2zoyb2 (B:75-174)
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Protein Domains
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Homeodomain-like
(373)
Family
:
Tetracyclin repressor-like, N-terminal domain
(97)
Protein domain
:
Transcriptional regulator Cgl2612
(3)
Corynebacterium glutamicum [TaxId: 1718]
(3)
1a
d2zoya1
A:1-74
1b
d2zoyb1
B:3-74
Fold
:
Tetracyclin repressor-like, C-terminal domain
(116)
Superfamily
:
Tetracyclin repressor-like, C-terminal domain
(116)
Family
:
Tetracyclin repressor-like, C-terminal domain
(114)
Protein domain
:
Transcriptional regulator Cgl2612
(3)
Corynebacterium glutamicum [TaxId: 1718]
(3)
2a
d2zoya2
A:75-175
2b
d2zoyb2
B:75-174
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2zoyB00 (B:3-174)
1b: CATH_2zoyA00 (A:1-175)
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)
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)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Tetracycline Repressor; domain 2
(126)
Homologous Superfamily
:
Tetracycline Repressor, domain 2
(124)
Corynebacterium glutamicum (Corynebacterium glutamicum atcc 13032)
(1)
1a
2zoyB00
B:3-174
1b
2zoyA00
A:1-175
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_TetR_N_2zoyB01 (B:9-55)
1b: PFAM_TetR_N_2zoyB02 (B:9-55)
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Clan
:
HTH
(544)
Family
:
TetR_N
(84)
Corynebacterium glutamicum (Brevibacterium flavum)
(5)
1a
TetR_N-2zoyB01
B:9-55
1b
TetR_N-2zoyB02
B:9-55
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Asymmetric Unit 1
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Asym.Unit (67 KB)
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