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2OCE
Asym. Unit
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Asym.Unit (123 KB)
Biol.Unit 1 (118 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TEX FAMILY PROTEIN PA5201 FROM PSEUDOMONAS AERUGINOSA
Authors
:
X. Jin, T. Min, S. K. Burley, L. Shapiro, New York Sgx Research Center For Structural Genomics (Nysgxrc)
Date
:
20 Dec 06 (Deposition) - 02 Jan 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Conserved Hypothetical Protein Pa5201, Putative Transcriptional Accessory Protein, Structural Genomics, Psi, Protein Structure Initiative, New York Structural Genomics Research Consortium, Nysgrc, New York Sgx Research Center For Structural Genomics, Nysgxrc, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. Jin, T. Min, S. K. Burley, L. Shapiro
Crystal Structure Of Hypothetical Protein Pa5201 From Pseudomonas Aeruginosa
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(4, 5)
Info
All SCOP Domains
1a: SCOP_d2ocea1 (A:474-563)
1b: SCOP_d2ocea2 (A:564-636)
2a: SCOP_d2ocea3 (A:2-324)
3a: SCOP_d2ocea4 (A:637-730)
4a: SCOP_d2ocea5 (A:325-473)
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Protein Domains
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
SAM domain-like
(639)
Superfamily
:
RuvA domain 2-like
(26)
Family
:
Tex HhH-containing domain-like
(3)
Protein domain
:
Transcriptional accessory factor Tex
(3)
Pseudomonas aeruginosa [TaxId: 287]
(3)
1a
d2ocea1
A:474-563
1b
d2ocea2
A:564-636
Fold
:
Tex N-terminal region-like
(3)
Superfamily
:
Tex N-terminal region-like
(3)
Family
:
Tex N-terminal region-like
(3)
Protein domain
:
Transcriptional accessory factor Tex
(3)
Pseudomonas aeruginosa [TaxId: 287]
(3)
2a
d2ocea3
A:2-324
Class
:
All beta proteins
(24004)
Fold
:
OB-fold
(1179)
Superfamily
:
Nucleic acid-binding proteins
(590)
Family
:
Cold shock DNA-binding domain-like
(310)
Protein domain
:
Tex S1-domain
(3)
Pseudomonas aeruginosa [TaxId: 287]
(3)
3a
d2ocea4
A:637-730
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ribonuclease H-like motif
(1424)
Superfamily
:
Ribonuclease H-like
(775)
Family
:
Tex RuvX-like domain-like
(3)
Protein domain
:
Transcriptional accessory factor Tex
(3)
Pseudomonas aeruginosa [TaxId: 287]
(3)
4a
d2ocea5
A:325-473
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CATH Domains
(5, 5)
Info
all CATH domains
1a: CATH_2oceA03 (A:328-455)
2a: CATH_2oceA01 (A:2-114)
3a: CATH_2oceA04 (A:503-634)
4a: CATH_2oceA02 (A:115-327,A:456-502)
5a: CATH_2oceA05 (A:635-730)
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)
Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Nucleotidyltransferase; domain 5
(788)
Homologous Superfamily
:
Ribonuclease H-like (UPF0081)
(8)
Pseudomonas aeruginosa pao1. Organism_taxid: 208964. Strain: pa01.
(1)
1a
2oceA03
A:328-455
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Arc Repressor Mutant, subunit A
(1030)
Homologous Superfamily
:
RuvA domain 2-like
(3)
Pseudomonas aeruginosa pao1. Organism_taxid: 208964. Strain: pa01.
(1)
2a
2oceA01
A:2-114
Topology
:
DNA polymerase; domain 1
(617)
Homologous Superfamily
:
Tex RuvX-like domain-like
(3)
Pseudomonas aeruginosa pao1. Organism_taxid: 208964. Strain: pa01.
(1)
3a
2oceA04
A:503-634
Topology
:
Tex N-terminal region-like
(3)
Homologous Superfamily
:
Tex N-terminal region-like
(3)
Pseudomonas aeruginosa pao1. Organism_taxid: 208964. Strain: pa01.
(1)
4a
2oceA02
A:115-327,A:456-502
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
OB fold (Dihydrolipoamide Acetyltransferase, E2P)
(1040)
Homologous Superfamily
:
Nucleic acid-binding proteins
(483)
Pseudomonas aeruginosa pao1. Organism_taxid: 208964. Strain: pa01.
(1)
5a
2oceA05
A:635-730
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Pfam Domains
(3, 3)
Info
all PFAM domains
1a: PFAM_HHH_3_2oceA01 (A:495-559)
2a: PFAM_S1_2oceA02 (A:651-724)
3a: PFAM_Tex_N_2oceA03 (A:16-206)
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)
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)
Clan
:
HHH
(112)
Family
:
HHH_3
(1)
Pseudomonas aeruginosa
(1)
1a
HHH_3-2oceA01
A:495-559
Clan
:
OB
(224)
Family
:
S1
(23)
Pseudomonas aeruginosa
(1)
2a
S1-2oceA02
A:651-724
Clan
:
no clan defined [family: Tex_N]
(1)
Family
:
Tex_N
(1)
Pseudomonas aeruginosa
(1)
3a
Tex_N-2oceA03
A:16-206
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Asymmetric Unit 1
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