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2HZT
Biol. Unit 2
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Asym.Unit (75 KB)
Biol.Unit 1 (36 KB)
Biol.Unit 2 (35 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A PUTATIVE HTH-TYPE TRANSCRIPTIONAL REGULATOR YTCD
Authors
:
M. Madegowda, S. Eswaramoorthy, K. Desigan, S. K. Burley, S. Swaminath York Sgx Research Center For Structural Genomics (Nysgxrc)
Date
:
09 Aug 06 (Deposition) - 29 Aug 06 (Release) - 05 Dec 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Dna-Binding Protein, Hth-Type Transcription Regulators, Structural Genomics, Psi-2, Protein Structure Initiative, New York Sgx Research Center For Structural Genomics, Nysgxrc, Transcription Regulator
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Madegowda, S. Eswaramoorthy, K. Desigan, S. K. Burley, S. Swaminathan
Crystal Structure Of A Putative Hth-Type Transcription Regulator Ytcd
To Be Published
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Hetero Components
(2, 14)
Info
All Hetero Components
1a: CYSTEINE-S-SULFONIC ACID (CSUa)
1b: CYSTEINE-S-SULFONIC ACID (CSUb)
1c: CYSTEINE-S-SULFONIC ACID (CSUc)
1d: CYSTEINE-S-SULFONIC ACID (CSUd)
1e: CYSTEINE-S-SULFONIC ACID (CSUe)
1f: CYSTEINE-S-SULFONIC ACID (CSUf)
1g: CYSTEINE-S-SULFONIC ACID (CSUg)
1h: CYSTEINE-S-SULFONIC ACID (CSUh)
1i: CYSTEINE-S-SULFONIC ACID (CSUi)
1j: CYSTEINE-S-SULFONIC ACID (CSUj)
1k: CYSTEINE-S-SULFONIC ACID (CSUk)
1l: CYSTEINE-S-SULFONIC ACID (CSUl)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
2i: SELENOMETHIONINE (MSEi)
2j: SELENOMETHIONINE (MSEj)
2k: SELENOMETHIONINE (MSEk)
2l: SELENOMETHIONINE (MSEl)
2m: SELENOMETHIONINE (MSEm)
2n: SELENOMETHIONINE (MSEn)
2o: SELENOMETHIONINE (MSEo)
2p: SELENOMETHIONINE (MSEp)
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No.
Name
Count
Type
Full Name
1
CSU
6
Mod. Amino Acid
CYSTEINE-S-SULFONIC ACID
2
MSE
8
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: HTH_HXLR (C:4-98,D:4-98)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HTH_HXLR
PS51118
HxlR-type HTH domain profile.
YTCD_BACSU
8-106
2
-
-
C:4-98
D:4-98
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Exons
(0, 0)
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SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d2hztb_ (B:)
1b: SCOP_d2hztc_ (C:)
1c: SCOP_d2hztd_ (D:)
2a: SCOP_d2hzta1 (A:4-98)
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Protein Domains
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)
(
)
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(
)
Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Winged helix DNA-binding domain
(576)
Family
:
automated matches
(118)
Protein domain
:
automated matches
(118)
Bacillus subtilis [TaxId: 1423]
(6)
1a
d2hztb_
B:
1b
d2hztc_
C:
1c
d2hztd_
D:
Family
:
HxlR-like
(6)
Protein domain
:
Putative transcriptional regulator YtcD
(1)
Bacillus subtilis [TaxId: 1423]
(1)
2a
d2hzta1
A:4-98
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_2hztC00 (C:2-98)
1b: CATH_2hztD00 (D:2-98)
1c: CATH_2hztA00 (A:2-98)
1d: CATH_2hztB00 (B:2-98)
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Organisms
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)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Arc Repressor Mutant, subunit A
(1030)
Homologous Superfamily
:
'winged helix' repressor DNA binding domain
(507)
Bacillus subtilis. Organism_taxid: 1423.
(6)
1a
2hztC00
C:2-98
1b
2hztD00
D:2-98
1c
2hztA00
A:2-98
1d
2hztB00
B:2-98
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (75 KB)
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