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1ZEL
Biol. Unit 1
Info
Asym.Unit (110 KB)
Biol.Unit 1 (53 KB)
Biol.Unit 2 (53 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF RV2827C PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS
Authors
:
R. Janowski, S. Panjikar, J. Mueller-Dieckmann, M. S. Weiss, Tb Struc Genomics Consortium (Tbsgc)
Date
:
19 Apr 05 (Deposition) - 02 May 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.93
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Rv2827C, Hypothetical Protein, Winged-Helix, Helix-Turn-Helix, Auto- Rickshaw, Structural Genomics, Psi, Protein Structure Initiative, Tb Structural Genomics Consortium, Tbsgc, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Janowski, S. Panjikar, A. N. Eddine, S. H. Kaufmann, M. S. Weiss
Structural Analysis Reveals Dna Binding Properties Of Rv2827C, A Hypothetical Protein From Mycobacterium Tuberculosis.
J Struct Funct Genomics V. 10 137 2009
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Hetero Components
(2, 10)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: FORMIC ACID (FMTa)
2b: FORMIC ACID (FMTb)
2c: FORMIC ACID (FMTc)
2d: FORMIC ACID (FMTd)
2e: FORMIC ACID (FMTe)
2f: FORMIC ACID (FMTf)
2g: FORMIC ACID (FMTg)
2h: FORMIC ACID (FMTh)
2i: FORMIC ACID (FMTi)
2j: FORMIC ACID (FMTj)
2k: FORMIC ACID (FMTk)
2l: FORMIC ACID (FMTl)
2m: FORMIC ACID (FMTm)
2n: FORMIC ACID (FMTn)
2o: FORMIC ACID (FMTo)
3a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
4a: SODIUM ION (NAa)
4b: SODIUM ION (NAb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
-1
Ligand/Ion
ACETATE ION
2
FMT
9
Ligand/Ion
FORMIC ACID
3
MPD
1
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
4
NA
-1
Ligand/Ion
SODIUM ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC4 (SOFTWARE)
04: AC5 (SOFTWARE)
05: AC8 (SOFTWARE)
06: AC9 (SOFTWARE)
07: BC1 (SOFTWARE)
08: BC2 (SOFTWARE)
09: BC5 (SOFTWARE)
10: BC6 (SOFTWARE)
11: BC7 (SOFTWARE)
12: BC8 (SOFTWARE)
13: BC9 (SOFTWARE)
14: CC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:164 , ASP A:206 , ASP A:210 , HOH B:752
BINDING SITE FOR RESIDUE NA A 401
02
AC2
SOFTWARE
HOH A:763 , ARG B:164 , ASP B:206 , ASP B:210
BINDING SITE FOR RESIDUE NA B 402
03
AC4
SOFTWARE
THR A:40 , GLY A:43 , CYS A:44 , GLY A:45 , SER B:140
BINDING SITE FOR RESIDUE ACT B 602
04
AC5
SOFTWARE
ALA A:170 , MET B:0 , ALA B:79 , SER B:81
BINDING SITE FOR RESIDUE MPD A 501
05
AC8
SOFTWARE
VAL A:141 , ARG A:143
BINDING SITE FOR RESIDUE FMT A 703
06
AC9
SOFTWARE
TYR A:84 , SER A:105 , GLN A:116
BINDING SITE FOR RESIDUE FMT A 704
07
BC1
SOFTWARE
TRP A:14 , HOH A:766 , VAL B:141 , ARG B:143 , HOH B:869
BINDING SITE FOR RESIDUE FMT B 705
08
BC2
SOFTWARE
PRO A:145 , GLY A:222 , ARG A:223 , HOH A:794
BINDING SITE FOR RESIDUE FMT A 707
09
BC5
SOFTWARE
THR A:225 , TRP A:228 , ARG A:251 , HIS A:252 , THR A:253 , HOH A:738
BINDING SITE FOR RESIDUE FMT A 710
10
BC6
SOFTWARE
PRO A:127 , ARG A:190
BINDING SITE FOR RESIDUE FMT A 711
11
BC7
SOFTWARE
ASP A:118 , GLY A:119 , SER A:212 , ARG A:215 , HOH A:752
BINDING SITE FOR RESIDUE FMT A 712
12
BC8
SOFTWARE
ARG A:17 , GLU A:41 , ALA A:42 , HOH A:768 , HOH A:780
BINDING SITE FOR RESIDUE FMT A 713
13
BC9
SOFTWARE
GLY A:111 , HIS A:203 , SER B:20
BINDING SITE FOR RESIDUE FMT A 714
14
CC2
SOFTWARE
VAL A:66 , LYS A:67 , PRO A:132 , ASP A:133 , GLY A:134
BINDING SITE FOR RESIDUE FMT A 716
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1zela1 (A:1-82)
1b: SCOP_d1zelb1 (B:-2-82)
2a: SCOP_d1zela2 (A:83-294)
2b: SCOP_d1zelb2 (B:83-295)
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Protein Domains
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Winged helix DNA-binding domain
(576)
Family
:
Rv2827c N-terminal domain-like
(1)
Protein domain
:
Hypothetical protein Rv2827c
(1)
Mycobacterium tuberculosis [TaxId: 1773]
(1)
1a
d1zela1
A:1-82
1b
d1zelb1
B:-2-82
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Rv2827c C-terminal domain-like
(1)
Superfamily
:
Rv2827c C-terminal domain-like
(1)
Family
:
Rv2827c C-terminal domain-like
(1)
Protein domain
:
Hypothetical protein Rv2827c
(1)
Mycobacterium tuberculosis [TaxId: 1773]
(1)
2a
d1zela2
A:83-294
2b
d1zelb2
B:83-295
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (110 KB)
Header - Asym.Unit
Biol.Unit 1 (53 KB)
Header - Biol.Unit 1
Biol.Unit 2 (53 KB)
Header - Biol.Unit 2
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