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1W4M
Asym. Unit
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Asym.Unit (203 KB)
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Models
(10 )
Title
:
STRUCTURE OF THE HUMAN PLECKSTRIN DEP DOMAIN BY MULTIDIMENSIONAL NMR
Authors
:
C. Civera, B. Simon, G. Stier, M. Sattler, M. J. Macias
Date
:
26 Jul 04 (Deposition) - 15 Dec 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (10 x)
Keywords
:
Signal Transduction, Dep Domain, Human Pleckstrin
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Civera, B. Simon, G. Stier, M. Sattler, M. J. Macias
Structure And Dynamics Of The Human Pleckstrin Dep Domain: Distinct Molecular Features Of A Novel Dep Domain Subfamily
Proteins: Struct. , Funct. , V. 58 354 2005 Genet.
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: DEP (A:16-99)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DEP
PS50186
DEP domain profile.
PLEK_HUMAN
136-221
1
A:16-99
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Exons
(3, 3)
Info
All Exons
Exon 1.3 (A:5-7)
Exon 1.4 (A:7-38)
Exon 1.5 (A:38-99)
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All Exon Boundaries
1: Boundary 1.2/1.3
2: Boundary 1.3/1.4
3: Boundary 1.4/1.5
4: Boundary 1.5/1.6b
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000234313
1a
ENSE00001911788
chr2:
68592305-68592525
221
PLEK_HUMAN
1-14
14
0
-
-
1.2
ENST00000234313
2
ENSE00000963053
chr2:
68607460-68607615
156
PLEK_HUMAN
15-66
52
0
-
-
1.3
ENST00000234313
3
ENSE00000758794
chr2:
68607855-68608036
182
PLEK_HUMAN
67-127
61
1
A:5-7
3
1.4
ENST00000234313
4
ENSE00000758796
chr2:
68609674-68609765
92
PLEK_HUMAN
127-158
32
1
A:7-38
32
1.5
ENST00000234313
5
ENSE00000758798
chr2:
68613634-68613818
185
PLEK_HUMAN
158-219
62
1
A:38-99
62
1.6b
ENST00000234313
6b
ENSE00000758800
chr2:
68615519-68615623
105
PLEK_HUMAN
220-254
35
0
-
-
1.7
ENST00000234313
7
ENSE00000758802
chr2:
68620294-68620377
84
PLEK_HUMAN
255-282
28
0
-
-
1.8a
ENST00000234313
8a
ENSE00000758804
chr2:
68621239-68621308
70
PLEK_HUMAN
283-306
24
0
-
-
1.9b
ENST00000234313
9b
ENSE00001163794
chr2:
68622812-68624585
1774
PLEK_HUMAN
306-350
45
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1w4ma_ (A:)
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)
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(
)
Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Winged helix DNA-binding domain
(576)
Family
:
DEP domain
(6)
Protein domain
:
Pleckstrin
(3)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1w4ma_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1w4mA00 (A:5-99)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Arc Repressor Mutant, subunit A
(1030)
Homologous Superfamily
:
'winged helix' repressor DNA binding domain
(507)
Human (Homo sapiens)
(70)
1a
1w4mA00
A:5-99
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_DEP_1w4mA01 (A:19-99)
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Clan
:
no clan defined [family: DEP]
(7)
Family
:
DEP
(7)
Homo sapiens (Human)
(2)
1a
DEP-1w4mA01
A:19-99
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