Entries with manually generated images from the JenaLib are marked in bold .
NAMES FOR MODIFIED B-DNA'S
----------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
----------------------------------------------------------------------------
BD0011 458D n.a. 5'- Y
D(*CP*GP*(BRO)CP*AP*TP*AP*TP*TP*TP*GP*CP*G)-
3', 5'-
D(*CP*GP*CP*AP*AP*AP*TP*AP*TP*GP*CP*G)-3'
BD0021 1CW9 n.a. 5'-D(*CP*CP*AP*GP*(XL1)GP*CP*CP*TP*GP*G)-3' Y
BD0031 1EDR n.a. 5'- Y
D(*CP*GP*CP*GP*(OCH3)AP*AP*TP*TP*CP*GP*CP*G)
-3'
BD0043 1G75 n.a. 5'- Y
D(*CP*GP*CP*GP*AP*AP*TP*(FOR)UP*CP*GP*CP*G)-
3'
BD0044 1G8N n.a. 5'- Y
D(*CP*GP*CP*GP*AP*AP*TP*(FOR)UP*CP*GP*CP*G)-
3'
BD0045 1G8U n.a. 5'- Y
D(*CP*GP*CP*GP*AP*AP*TP*(FOR)UP*CP*GP*CP*G)-
3'
BD0046 1G8V n.a. 5'- Y
D(*CP*GP*CP*GP*AP*AP*TP*(FOR)UP*CP*GP*CP*G)-
3'
BD0048 1I3T n.a. 5'- Y
D(*CP*GP*CP*GP*AP*AP*TP*TP*(OME)CP*GP*CP*GP)
-3'
BD0049 1I47 n.a. 5'- Y
D(*CP*GP*CP*GP*AP*AP*TP*TP*(OME)CP*GP*CP*GP)
-3'
BD0053 1J8L n.a. 5'- Y
D(*CP*GP*CP*AP*AP*AP*TP*TP*(OME)CP*GP*CP*G)-
3'
BD0058 1MV7 n.a. 5'- Y
D(*GP*CP*(BRO)UP*TP*AP*AP*TP*(BRO)UP*CP*G)-
3'
BDBP23 n.a. n.a. 5'-D(*CP(CH3)*G)-3' Y
BDFP24 1D97 n.a. 5'-D(RP*GP(S)*CP*GP(S)*CP*GP(S)*C)-3' Y
BDJB27 2D25 n.a. 5'-D(*CP*CP*AP*GP*GP*CP*(CH3)CP*TP*GP*G)-3' Y
BDJB43 1D60 n.a. 5'-D(*CP*CP*AP*AP*CP*IP*TP*TP*GP*G)-3', Y
TRIGONAL
BDJB44 1D61 n.a. 5'-D(*CP*CP*AP*AP*CP*IP*TP*TP*GP*G)-3', Y
MONOCLINIC
BDJB48 1DA3 n.a. 5'-D(*CP*GP*AP*TP*CP*GP*(CH3)AP*TP*CP*G)-3' Y
BDJB49 122D n.a. 5'-D(*CP*CP*AP*GP*GP*CP*(CH3)CP*TP*GP*G)-3' Y
BDJB50 123D n.a. 5'-D(*CP*CP*AP*GP*GP*CP*(CH3)CP*TP*GP*G)-3' Y
BDJB57 183D n.a. 5'-D(*CP*CP*AP*(O)GP*CP*GP*CP*TP*GP*G)-3' Y
BDJB77 286D n.a. 5'-D(*CP*CP*IP*IP*IP*CP*CP*CP*GP*G)-3' Y
BDJS30 n.a. n.a. 5'-D(*CP*CP*AP*GP*GP*CP*)-ARA(*CP*)- n.a.
D(*TP*GP*G)-3'
BDLB03 3BNA FAJKAC02 5'- Y
D(*CP*GP*CP*GP*AP*AP*TP*TP*(BR)CP*GP*CP*G)-
3', MPD, 293K
BDLB04 4BNA FAJKAC01 5'- Y
D(*CP*GP*CP*GP*AP*AP*TP*TP*(BR)CP*GP*CP*G)-
3', MPD, 280K
BDLB13 4DNB C132 5'- Y
D(*CP*GP*CP*GP*AP*(CH3)AP*TP*TP*CP*GP*CP*G)-
3'
----------------------------------------------------------------------------
Page 1 created by the NDB Project on Wed May 26 14:30:06 2004
NAMES FOR MODIFIED B-DNA'S
----------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
----------------------------------------------------------------------------
BDLB40 1D77 n.a. 5'-D(*CP*GP*CP*IP*AP*AP*TP*TP*CP*GP*CP*G)-3' Y
BDLB72 265D n.a. 5'- Y
D(*CP*GP*(CH3)CP*GP*AP*AP*TP*TP*(CH3)CP*GP*C
P*G)-3', 100 K
BDLB73 266D n.a. 5'- Y
D(*CP*GP*CP*GP*AP*AP*TP*TP*(CH3)CP*GP*CP*G)-
3'
BDLB74 270D n.a. 5'- Y
D(*CP*GP*CP*GP*AP*AP*TP*TP*(CH3)CP*GP*CP*G)-
3', 100 K
BDLB76 285D n.a. 5'- Y
D(*CP*GP*CP*AP*IP*AP*TP*(CH3)CP*TP*GP*CP*G)-
3'
BDLB82 297D n.a. 5'- Y
D(*CP*GP*CP*AP*IP*AP*TP*(CH3)CP*TP*GP*CP*G)-
3'
BDLB83 329D n.a. 5'- Y
D(*AP*CP*CP*GP*CP*(CH3)CP*GP*GP*CP*GP*CP*C)-
3'
BDLB84 388D n.a. 5'- Y
D(*CP*GP*CP*GP*AP*AP*(FLO)TP*(FLO)TP*CP*GP*C
P*G)-3'
BDLB85 389D n.a. 5'- Y
D(*CP*GP*CP*GP*AP*AP*(FLO)TP*TP*CP*GP*CP*G)-
3'
BDLS67 233D n.a. 5'-D(*CP*GP*CP*GP*AP*AP*)-(S)D(*TP*TP*)- Y
D(*CP*GP*CP*G)-3'
BDLS79 290D n.a. 5'-D(*CP*GP*CP*GP*AP*AP*)-(CH3)C(*TP*TP*)- Y
D(*CP*GP*CP*G)-3'
BDLS80 291D n.a. 5'-D(*CP*GP*CP*GP*AP*AP*)-(OH)C(*TP*TP*)- Y
D(*CP*GP*CP*G)-3'
UD0005 454D n.a. 5'-D(*GP*(5IU)P*TP*GP*CP*AP*AP*C)-3' Y
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Page 2 created by the NDB Project on Wed May 26 14:30:06 2004