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(-) Description

Title :  STREPTOCOCCUS PNEUMONIA TIGR4 FLAVODOXIN: STRUCTURAL AND BIOPHYSICAL CHARACTERIZATION OF A NOVEL DRUG TARGET
 
Authors :  A. Rodriguez-Cardenas, A. L. Rojas, A. Velazquez-Campoy, R. Hurtado- J. Sancho
Date :  18 Jul 16  (Deposition) - 31 Aug 16  (Release) - 28 Sep 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Flavodoxin, Protein Stability, Fmn Binding, Drug Target. Streptococcus Pneumoniae, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Rodriguez-Cardenas, A. L. Rojas, M. Conde-Gimenez, A. Velazquez-Campoy, R. Hurtado-Guerrero, J. Sancho
Streptococcus Pneumoniae Tigr4 Flavodoxin: Structural And Biophysical Characterization Of A Novel Drug Target.
Plos One V. 11 61020 2016
PubMed-ID: 27649488  |  Reference-DOI: 10.1371/JOURNAL.PONE.0161020

(-) Compounds

Molecule 1 - FLAVODOXIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Gene: FLD, SP_1297
    Organism Scientific: STREPTOCOCCUS PNEUMONIAE SEROTYPE 4 (STRAIN ATCC BAA-334 / TIGR4)
    Organism Taxid: 170187

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1PO41Ligand/IonPHOSPHATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:10 , MET A:11 , THR A:12 , GLY A:13 , ASN A:14 , THR A:15 , TYR A:57 , HOH A:305 , HOH A:322binding site for residue PO4 A 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5LJL)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5LJL)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5LJL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5LJL)

(-) Exons   (0, 0)

(no "Exon" information available for 5LJL)

(-) Sequences/Alignments

Asymmetric/Biological Unit
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:147
                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee....hhhhhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhh.eeeee.........hhhhhhhhhhhhh......eeeeeeee.......hhhhhhhhhhhhhh..ee....eeee...hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ljl A   0 GMALAKIVFASMTGNTEEIADIVADKLRDLGLDVDVDECTTVDASDFLEADIAIVATYTYGDGELPDEMMDFYEDLADLNLNGKIYGVVGSGDTFYDEFCKAVDDFDRVFVSTGAEKGSECVKVDLSAEEEDIERLEQFAEELAAKV 146
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5LJL)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5LJL)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5LJL)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

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  Q8DPG4_STRR6 | Q8DPG4
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8DPG4_STRR6 | Q8DPG4: 5lji

(-) Related Entries Specified in the PDB File

5lji THE SAME PROTEIN WITH FMN