Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF TWO-SUBUNIT PYRUVATE CARBOXYLASE FROM METHYLOBACILLUS FLAGELLATUS
 
Authors :  P. H. Choi, L. Tong
Date :  07 Jul 16  (Deposition) - 19 Oct 16  (Release) - 19 Oct 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.01
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Biotin, Ligase, Tim Barrel, Pyruvate (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. H. Choi, J. Jo, Y. C. Lin, M. H. Lin, C. Y. Chou, L. E. Dietrich, L. Tong
A Distinct Holoenzyme Organization For Two-Subunit Pyruvate Carboxylase.
Nat Commun V. 7 12713 2016
PubMed-ID: 27708276  |  Reference-DOI: 10.1038/NCOMMS12713

(-) Compounds

Molecule 1 - PYRUVATE CARBOXYLASE SUBUNIT ALPHA
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: MFLA_1511
    Organism Scientific: METHYLOBACILLUS FLAGELLATUS, METHYLOBACILLUS FLAGELLATUS (STRAIN KT / ATCC 51484 / DSM 6875)
    Organism Taxid: 265072
    Strain: KT / ATCC 51484 / DSM 6875
 
Molecule 2 - PYRUVATE CARBOXYLASE SUBUNIT BETA
    Chains: C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: MFLA_1512
    Organism Scientific: METHYLOBACILLUS FLAGELLATUS (STRAIN KT / ATCC 51484 / DSM 6875)
    Organism Taxid: 265072
    Strain: KT / ATCC 51484 / DSM 6875

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 6)

Asymmetric/Biological Unit (3, 6)
No.NameCountTypeFull Name
1BTI1Ligand/Ion5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL
2MN3Ligand/IonMANGANESE (II) ION
3PYR2Ligand/IonPYRUVIC ACID

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS C:581 , GLN D:16 , ASP D:52 , TYR D:57 , ARG D:83 , TYR D:90 , MET D:300 , THR D:338 , SER D:341 , GLN D:342 , PYR D:2001binding site for residue BTI C 2000
2AC2SOFTWAREARG C:12 , GLN C:16 , GLY C:48 , LEU C:81 , ARG C:83 , PHE C:116 , LYS C:174 , MET C:176binding site for residue PYR C 2001
3AC3SOFTWAREASP C:13 , LYS C:174 , MET C:176 , HIS C:203 , HIS C:205binding site for residue MN C 2002
4AC4SOFTWAREBTI C:2000 , ARG D:12 , GLN D:16 , GLY D:48 , ALA D:49 , LEU D:81 , ARG D:83 , PHE D:116 , LYS D:174 , THR D:338binding site for residue PYR D 2001
5AC5SOFTWAREASP D:13 , LYS D:174 , HIS D:203 , HIS D:205binding site for residue MN D 2002
6AC6SOFTWAREASP F:13 , LYS F:174 , HIS F:203 , HIS F:205binding site for residue MN F 701

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5KS8)

(-) Cis Peptide Bonds  (5, 5)

Asymmetric/Biological Unit
No.Residues
1Ala A:241 -Pro A:242
2Ala B:241 -Pro B:242
3Thr C:338 -Pro C:339
4Thr D:338 -Pro D:339
5Thr E:338 -Pro E:339

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5KS8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5KS8)

(-) Exons   (0, 0)

(no "Exon" information available for 5KS8)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:404
                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..hhhhhhhhhhhhhhhh.eeeeee.hhhhhhhhhhhh.eeee..........hhhhhhhhhhhhh..eee........hhhhhhhhhhhh.ee...hhhhhhhhhhhhhhhhhhhhh.............eeeeeeeee.....ee...eeeeeeee..eeeeeee.....hhhhhhhhhhhhhhhhhhh...eeeeeeeee.....eeeeeee.....hhhhhhhhhh.hhhhhhhhhhh......hhhhh....eeeeeeee.eehhhh.ee..ee..eee......eeeee......ee......eeeeeeeee.hhhhhhhhhhhhhhhheee....hhhhhhhhhhhhhhhhh.........hhhhhh.....hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ks8 A   1 MIKKILIANRGEIAVRIVRACSEMGIKSVAIYSDADRHALHVKKADEAYNIGSDPVLGYLNAHNIVNLAVASGCDALHPGYGFLSENPELAEICARRGIKFIGPDAKVIRQMGDKIQARTAMIKAGIPCVGSSGVVNPRHIEVQVLADSHGNVIHLFERDCSIQRRNQKLIEIAPSPQLSKAQREYIGNLAVKAAKAVGYKNAGTVEFLLDSDNNFYFMEMNTRLQVEHTVTEQITGIDIVQEQIRVADGQRLQYKQSEVQYRGFAMEFRINAEDPKNDFLPSFGKITRYYAPGGPGIRMDAAMYSGYVIPPYYDSMCAKLTVWALNWESVVERGRRALNDTVVYGVKTTIPYYQEILKHPDFRNAIFNTSFVESHPELANYATQFPRELVAAAISAAIAAHEG 471
                                    10        20        30        40        50        60        70        80        90       100       110       120       130 ||    207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467    
                                                                                                                                                             132|                                                                                                                                                                                                                                                                               
                                                                                                                                                              200                                                                                                                                                                                                                                                                               


Chain B from PDB  Type:PROTEIN  Length:404
                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..hhhhhhhhhhhhhhhh.eeeeee.hhhhhhhhhhhh.eeee..........hhhhhhhhhhhhh..eee........hhhhhhhhhhhh.ee...hhhhhhhhhhhhhhhhhhhhh.............eeeeeeeee.....eeeeeeeeeeeee..eeeeeee.....hhhhhhhhhhhhhhhhhhh...eeeeeeeee.....eeeeeee.....hhhhhhhhhh.hhhhhhhhhhh......hhhhh....eeeeeeee.eehhhh.ee......eee......eeeee..............eeeeeeeee.hhhhhhhhhhhhhhhheee....hhhhhhhhhhhhhhhhh.........hhhhhh.....hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ks8 B   1 MIKKILIANRGEIAVRIVRACSEMGIKSVAIYSDADRHALHVKKADEAYNIGSDPVLGYLNAHNIVNLAVASGCDALHPGYGFLSENPELAEICARRGIKFIGPDAKVIRQMGDKIQARTAMIKAGIPCVGSSGVVNPRHIEVQVLADSHGNVIHLFERDCSIQRRNQKLIEIAPSPQLSKAQREYIGNLAVKAAKAVGYKNAGTVEFLLDSDNNFYFMEMNTRLQVEHTVTEQITGIDIVQEQIRVADGQRLQYKQSEVQYRGFAMEFRINAEDPKNDFLPSFGKITRYYAPGGPGIRMDAAMYSGYVIPPYYDSMCAKLTVWALNWESVVERGRRALNDTVVYGVKTTIPYYQEILKHPDFRNAIFNTSFVESHPELANYATQFPRELVAAAISAAIAAHEG 471
                                    10        20        30        40        50        60        70        80        90       100       110       120       130 ||    207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467    
                                                                                                                                                             132|                                                                                                                                                                                                                                                                               
                                                                                                                                                              200                                                                                                                                                                                                                                                                               


Chain C from PDB  Type:PROTEIN  Length:603
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...hhhhhhhh...........hhhhhhhh...eeeeee.hhhhhhhhh...hhhhhhhhhhhhh....eeeeehhhhh......hhhhhhhhhhhhhhhh..eeee.....hhhhhhhhhhhhhhh..eeeeeee.......hhhhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh...eeee.hhhhh......hhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhh......hhhhhh.....hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh......hhhhhhhhh..........hhhhhhhhhh.......hhhhhh..hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhh......eeeeee..eeeeeeee............eeee...eeeeeeee..............................eeeeee......ee....eeeeeee..eeeeee....eeeeee......ee......eeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ks8 C   3 KVHVTDVVLRDGHQSLIATRMRTDDMLPICSKLDAVGYWSLEAWGGATFDACVRYLREDPWERLKKLRKALPNSRLQMLLRGQNLLGYRHYSDDVVRAFVQKSADNGIDVFRIFDAMNDLRNLKVSIESVKAVGKHAEGTISYTTSPVHDIPYFVNLAKELESFGCDTIAIKDMASLLTPQVTGDLVKALREAVSLPIHLHAHATSGLASMSIQRAVDNGVAIVDGCISSFAEGASLPATESIVAALKGTEYDTGLDIGLLQEISAYFREVRKKYWQFESEFTGVDTRVLVNQVPGGMISNLSNQLKEQGALDRMDAVLDEIPRVREDLGYPPLVTPTSQIVGTQAVLNVMTGARYKSVTNEVKNYLLGHYGKAPSTVNPDVRNLAVGNAQVIECRPADLLTAEMEKLRNEVEGLAASAADVLTYAMFPDLAKTFLQERNAGSLKPEPLLDKEAVTSRESHSRFAPTEFNVTLHGETFHIKLTGSGHHGEEQRPFYVSVDGVTEEVVVEILNEAKRKASSAASSGRPRPTHAGCVTTAMPGTIVDVKVNVGDKVSAGDAVLVIEAMKMENEIQASKSGVVVAINVKKGDSVTPDEALLEIQPD 617
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512 ||    534       544       554       564       574       584       594       604       614   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         514|                                                                                          
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          527                                                                                          


Chain D from PDB  Type:PROTEIN  Length:580
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee...hhhhhhhh...........hhhhhhhh...eeeeee.hhhhhhhhh...hhhhhhhhhhhhh....eeeeehhhhh......hhhhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhh..eeeeeee.......hhhhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh...eeee.hhhhh......hhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh........hhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh......hhhhhhhhh..........hhhhhhhhhh.......hhhhhh..hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh...............hhhhhh.....eeeeee..eeeeeeee..eeee...eee.eeee.................eeeeee......ee....eeeeeee..eeeeee....eeeeee......ee......eeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ks8 D   2 AKVHVTDVVLRDGHQSLIATRMRTDDMLPICSKLDAVGYWSLEAWGGATFDACVRYLREDPWERLKKLRKALPNSRLQMLLRGQNLLGYRHYSDDVVRAFVQKSADNGIDVFRIFDAMNDLRNLKVSIESVKAVGKHAEGTISYTTSPVHDIPYFVNLAKELESFGCDTIAIKDMASLLTPQVTGDLVKALREAVSLPIHLHAHATSGLASMSIQRAVDNGVAIVDGCISSFAEGASLPATESIVAALKGTEYDTGLDIGLLQEISAYFREVRKKYWQFESEFTGVDTRVLVNQVPGGMISNLSNQLKEQGALDRMDAVLDEIPRVREDLGYPPLVTPTSQIVGTQAVLNVMTGARYKSVTNEVKNYLLGHYGKAPSTVNPDVRNLAVGNAQVIECRPADLLTAEMEKLRNEVEGLAASAADVLTYAMFPDLAKTFLQERNAGSLKPEPLLDKEAVTSRESHSRFAPTEFNVTLHGETFHIKLTPFYVSVDGVTEEVVVEILNRPRPTHAGCVTTAMPGTIVDVKVNVGDKVSAGDAVLVIEAMKMENEIQASKSGVVVAINVKKGDSVTPDEALLEIQP 616
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481   ||  501       511  ||   546       556       566       576       586       596       606       616
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             485|               514|                                                                            
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              496                540                                                                            


Chain E from PDB  Type:PROTEIN  Length:430
                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...hhhhhhhh...........hhhhhhhh...eeeeee.hhhhhhhhh...hhhhhhhhhhhhh....eeeeehhhhh......hhhhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhh..eeeeeee.......hhhhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh...eeee.hhhhh...............hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh..hhhhhhhh..........hhhhhhhhhh.......hhhhhh.hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh......eeeeee..eeeeeeee.....eeee...eeeeeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ks8 E   3 KVHVTDVVLRDGHQSLIATRMRTDDMLPICSKLDAVGYWSLEAWGGATFDACVRYLREDPWERLKKLRKALPNSRLQMLLRGQNLLGYRHYSDDVVRAFVQKSADNGIDVFRIFDAMNDLRNLKVSIESVKAVGKHAEGTISYTTSPVHDIPYFVNLAKELESFGCDTIAIKDMASLLTPQVTGDLVKALREAVSLPIHLHAHATSGLASMSIQRAVDNGVAIVDGCISSFAEGASLPATTEYDTGLDIGLLQEISAYFREVRKKYWQFESEMDAVLDEIPRVREDLGYPPLVTPTSQIVGTQAVLNVMTGTNEVKNYLLGHYGKAPSTVNPDVRNLAVGNAQVIECRPADLLEKLRNEVEGLAASAADVLTYAMFPDLAKTFLQERNAGSLKPTEFNVTLHGETFHIKLTGQRPFYVSVDGVTEEVVVE 511
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242|      261       271       281 ||    324       334       344       354||     370       380       390       400  ||   414       424       434       444   ||  474       484 ||    501       511
                                                                                                                                                                                                                                                                         242|                            283|                                   355|                                      403|                                     448|              486|                 
                                                                                                                                                                                                                                                                          252                             317                                    362                                       408                                      469               494                 


Chain F from PDB  Type:PROTEIN  Length:482
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...hhhhhhhh...........hhhhhhhh...eeeeee.hhhhhhhhh...hhhhhhhhhhhhh....eeeeehhhhh......hhhhhhhhhhhhhhhh..eeee.....hhhhhhhhhhhhhhh..eeeeeee.......hhhhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh...eeee.hhhhh......hhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhh..........hhhhhh.....hhhhhh..hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh............eeeeee..eeeeeee..eeee...eee.eeee.................eeeeee......ee....eeeeeee..eeeeee....eeeeee......ee......eeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ks8 F   3 KVHVTDVVLRDGHQSLIATRMRTDDMLPICSKLDAVGYWSLEAWGGATFDACVRYLREDPWERLKKLRKALPNSRLQMLLRGQNLLGYRHYSDDVVRAFVQKSADNGIDVFRIFDAMNDLRNLKVSIESVKAVGKHAEGTISYTTSPVHDIPYFVNLAKELESFGCDTIAIKDMASLLTPQVTGDLVKALREAVSLPIHLHAHATSGLASMSIQRAVDNGVAIVDGCISSFAEGASLPATESIVEYDTGLDIGLLQEISAYFREVRKKYWQFESEFTGVDTRTNEVKNYLLGHYGKAPSTVNPDVRNQVIECRPADLLTAEMEKLRNEVEGLAASAADVLTYAMFPDLAKTFLQERNAGSLKPEPLLDAPTEFNVTLHGETFHIKLTFYVSVDGVTEEVVVEILGRPRPTHAGCVTTAMPGTIVDVKVNVGDKVSAGDAVLVIEAMKMENEIQASKSGVVVAINVKKGDSVTPDEALLEIQP 616
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242   ||  258       268       278       288 ||    369       379      |395       405       415       425       435       445       468       478      |499       509   ||  544       554       564       574       584       594       604       614  
                                                                                                                                                                                                                                                                             246|                                  290|                     386|                                                         453|               485|             513|                                                                             
                                                                                                                                                                                                                                                                              253                                   362                      393                                                          467                497              539
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5KS8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5KS8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5KS8)

(-) Gene Ontology  (7, 8)

Asymmetric/Biological Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    BTI  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PYR  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Ala A:241 - Pro A:242   [ RasMol ]  
    Ala B:241 - Pro B:242   [ RasMol ]  
    Thr C:338 - Pro C:339   [ RasMol ]  
    Thr D:338 - Pro D:339   [ RasMol ]  
    Thr E:338 - Pro E:339   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format | Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  5ks8
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  Q1H157_METFK | Q1H157
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
  Q1H158_METFK | Q1H158
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  Q1H157_METFK | Q1H157
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  Q1H158_METFK | Q1H158
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 5KS8)

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5KS8)