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(-) Description

Title :  CRYSTAL STRUCTURE OF PUTATIVE TETR FAMILY TRANSCRIPTION FACTOR FROM LISTERIA MONOCYTOGENES
 
Authors :  C. Chang, C. Tesar, S. Clancy, A. Joachimiak, Midwest Center For Str Genomics (Mcsg)
Date :  18 Jun 15  (Deposition) - 08 Jul 15  (Release) - 08 Jul 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.77
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Structural Genomics, Psi-Biology, Midwest Center For Structural Genomics, Mcsg, Transcriptional Factor, Listeria Monocytogenes (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Chang, C. Tesar, S. Clancy, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Crystal Structure Of Putative Tetr Family Transcription Factor From Listeria Monocytogenes
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE TRANSCRIPTION REGULATOR LMO0852
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG68
    Expression System Taxid: 562
    Gene: LMO0852
    Organism Scientific: LISTERIA MONOCYTOGENES SEROVAR 1/2A (STRAIN ATCC BAA-679 / EGD-E)
    Organism Taxid: 169963
    Strain: ATCC BAA-679 / EGD-E

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 6)

Asymmetric/Biological Unit (2, 6)
No.NameCountTypeFull Name
1EDO2Ligand/Ion1,2-ETHANEDIOL
2MSE4Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:101binding site for residue EDO A 201
2AC2SOFTWAREASP B:88 , ARG B:172 , HOH B:314binding site for residue EDO B 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5C4Y)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5C4Y)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5C4Y)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5C4Y)

(-) Exons   (0, 0)

(no "Exon" information available for 5C4Y)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:136
                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5c4y A  49 FLEVYQDSIQmELTELGRVAEREDLVGEEKLQSIFFVATDFSSNPDEKKFFQRAVFYPPKSLFQELKEETKTYEQLTNRILRETLEKIVSEEALVRWmHVFYALLDGLSVEHGIYDETEFELRRKSAWAVLASLLK 184
                                    58|       68        78        88        98       108       118       128       138       148       158       168       178      
                                     59-MSE                                                                                146-MSE                                  


Chain B from PDB  Type:PROTEIN  Length:136
                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh....hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5c4y B  49 FLEVYQDSIQmELTELGRVAEREDLVGEEKLQSIFFVATDFSSNPDEKKFFQRAVFYPPKSLFQELKEETKTYEQLTNRILRETLEKIVSEEALVRWmHVFYALLDGLSVEHGIYDETEFELRRKSAWAVLASLLK 184
                                    58|       68        78        88        98       108       118       128       138       148       158       168       178      
                                     59-MSE                                                                                146-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5C4Y)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5C4Y)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

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