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(-) Description

Title :  CRYSTAL STRUCTURE OF TOXT FROM VIBRIO CHOLERAE O395 BOUND TO (E)-4-(8-METHYLNAPHTHALEN-1-YL)BUT-3-ENOIC ACID
 
Authors :  F. J. Kull, A. R. Kelley
Date :  04 Aug 16  (Deposition) - 12 Apr 17  (Release) - 12 Apr 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Transcriptional Activator, Protein-Inhibitor Complex, Transcription- Transcription Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. J. Kull, A. R. Kelley
Crystal Structure Of Toxt From Vibrio Cholerae O395 Bound T (E)-4-(8-Methylnaphthalen-1-Yl)But-3-Enoic Acid
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ARAC FAMILY TRANSCRIPTIONAL REGULATOR
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: TOXT, TCPN, EN12_04130, ERS013198_02000, ERS013199_00625, ERS013200_01425, ERS013202_00629, ERS013206_00617, ERS013207_01424
    Organism Scientific: VIBRIO CHOLERAE
    Organism Taxid: 666
    Synonym: TCP PILUS VIRULENCE REGULATORY PROTEIN

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
170H1Ligand/Ion(3E)-4-(8-METHYLNAPHTHALEN-1-YL)BUT-3-ENOIC ACID
2MES2Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:12 , PHE A:22 , LYS A:31 , PHE A:33 , LYS A:230 , TYR A:266 , HOH A:401binding site for residue 70H A 301
2AC2SOFTWAREASN A:28 , LYS A:179 , TYR A:224 , SER A:227 , LEU A:228 , THR A:231 , HOH A:402 , HOH A:418binding site for residue MES A 302
3AC3SOFTWARETRP A:117 , ASN A:118 , ILE A:137 , LYS A:158 , HOH A:410binding site for residue MES A 303

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5SUX)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5SUX)

(-) Exons   (0, 0)

(no "Exon" information available for 5SUX)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:267
                                                                                                                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee....eeeeeeee....eeeee....eeeee....eeeee...eeeee....eeeeeeee.....eeeeeeeehhhhhhh.......hhhhhh.......eeeee.hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhh......hhhhhhhhhh.hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh...hhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5sux A   5 KSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT 271
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5SUX)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5SUX)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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  5sux
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 Related Entries

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        Q7BGC0_VIBCL | Q7BGC0: 4mlo

(-) Related Entries Specified in the PDB File

3gbg 3GBG CONTAINS THE SAME PROTEIN COMPLEXED WITH THE LIGAND PAM.
5suw