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(-) Description

Title :  DEPHOSPHO-COA KINASE FROM CAMPYLOBACTER JEJUNI.
 
Authors :  J. Osipiuk, M. Zhou, J. Stam, W. F. Anderson, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
Date :  06 May 15  (Deposition) - 13 May 15  (Release) - 13 May 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.57
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Structural Genomics, Idp00325, Dephospho-Coa Kinase, Center For Structural Genomics Of Infectious Diseases, Csgid (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Osipiuk, M. Zhou, J. Stam, W. F. Anderson, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
Dephospho-Coa Kinase From Campylobacter Jejuni.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - DEPHOSPHO-COA KINASE
    Chains: A, B, C, D
    EC Number: 2.7.1.24
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: COAE, CJ1530
    Organism Taxid: 192222
    Other Details: 3 N-TERMINAL RESIDUES, SNA, ARE CLONING ARTEFACTS
    Strain: NCTC 11168
    Synonym: DEPHOSPHOCOENZYME A KINASE

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 16)

Asymmetric/Biological Unit (2, 16)
No.NameCountTypeFull Name
1BME2Ligand/IonBETA-MERCAPTOETHANOL
2MSE14Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS B:13 , ASN B:178binding site for residue BME B 501
2AC2SOFTWARECYS D:13 , ASN D:178binding site for residue BME D 501

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4ZO4)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4ZO4)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4ZO4)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4ZO4)

(-) Exons   (0, 0)

(no "Exon" information available for 4ZO4)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:202
                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee.hhhhhhhhhhhhhhh..eeeehhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee........hhhhh.eeeee......hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...eee....hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4zo4 A   0 AmKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENALELEKIFSPFSLKNLLKKEKKIDRKILGEIVFNNKEAKKILENFTHPKIRAKILEQmQILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRImQRDKLSLEAAKARLDSQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGNm 201
                             |       9        19        29        39        49        59        69        79        89        99 |     109       119       129       139     | 149       159       169       179       189       199 |
                             |                                                                                                 101-MSE                                     145-MSE                                                 201-MSE
                             1-MSE                                                                                                                                                                                                    


Chain B from PDB  Type:PROTEIN  Length:194
                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee.hhhhhhhhhhhhhhh...eeehhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee........eeeeee.....hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4zo4 B   0 AmKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENALELEKIFSPFSLKNLLKKEKKIDRKILGEIVFNNKEAKKILENFTHPKIRAKILEQmQILDKENKAFFVEIPLFENLGKVIVIYTPKELSLKRImQRDKLSLEAAKARLDSQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKG 199
                             |       9        19        29        39        49        59        69        79        89        99 |     109       125       135       145       155       165       175       185       195    
                             |                                                                                                 101-MSE          118|                 145-MSE                                                  
                             1-MSE                                                                                                               125                                                                          


Chain C from PDB  Type:PROTEIN  Length:201
                                                                                                                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee.hhhhhhhhhhhhhhh..eeeehhhhhhhhhhhhhhhhhhhhhhhh....eee..eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeee........hhhhh.eeeeee.....hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4zo4 C   1 mKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENALELEKIFSPFSLKNLLKKEKKIDRKILGEIVFNNKEAKKILENFTHPKIRAKILEQmQILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRImQRDKLSLEAAKARLDSQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGNm 201
                            |       10        20        30        40        50        60        70        80        90       100|      110       120       130       140    |  150       160       170       180       190       200|
                            1-MSE                                                                                             101-MSE                                     145-MSE                                                 201-MSE


Chain D from PDB  Type:PROTEIN  Length:194
                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee.hhhhhhhhhhhhhhh...eeehhhhhhhhhhhhhhhhhhhhh.......eee..eehhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeee........eeeeee.....hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4zo4 D   0 AmKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENALELEKIFSPFSLKNLLKKEKKIDRKILGEIVFNNKEAKKILENFTHPKIRAKILEQmQILDKENKAFFVEIPLFENLGKVIVIYTPKELSLKRImQRDKLSLEAAKARLDSQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKG 199
                             |       9        19        29        39        49        59        69        79        89        99 |     109       125       135       145       155       165       175       185       195    
                             |                                                                                                 101-MSE          118|                 145-MSE                                                  
                             1-MSE                                                                                                               125
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4ZO4)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4ZO4)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4ZO4)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)

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