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(-) Description

Title :  CRYSTAL STRUCTURE OF (3R)-HYDROXYACYL-ACP DEHYDRATASE HADAB HETERO-DIMER FROM MYCOBACTERIUM SMEGMATIS
 
Authors :  R. Biswas, D. Hazra, D. Dutta, A. K. Das
Date :  24 Nov 14  (Deposition) - 11 Feb 15  (Release) - 18 Mar 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  Hotdog Fold, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Biswas, A. Dutta, D. Dutta, D. Hazra, D. R. Banerjee, A. Basak, A. K. Das
Crystal Structure Of Dehydratase Component Hadab Complex Of Mycobacterial Fas-Ii Pathway.
Biochem. Biophys. Res. Commun. V. 458 369 2015
PubMed-ID: 25656575  |  Reference-DOI: 10.1016/J.BBRC.2015.01.119

(-) Compounds

Molecule 1 - UPF0336 PROTEIN MSMEG_1340/MSMEI_1302
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PQE30
    Expression System Strain: M15
    Expression System Taxid: 1007065
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 7-144
    Gene: MSMEG_1340, MSMEI_1302
    Organism Scientific: MYCOBACTERIUM SMEGMATIS STR. MC2 155
    Organism Taxid: 246196
    Strain: MC2 155
 
Molecule 2 - MAOC FAMILY PROTEIN
    Chains: B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PQE30
    Expression System Strain: M15
    Expression System Taxid: 1007065
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 2-142
    Gene: MSMEG_1341, MSMEI_1303
    Organism Scientific: MYCOBACTERIUM SMEGMATIS STR. MC2 155
    Organism Taxid: 246196
    Strain: MC2 155
    Synonym: MAOC-LIKE DEHYDRATASE

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1SO41Ligand/IonSULFATE ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1SO42Ligand/IonSULFATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:85 , GLN A:86 , HIS B:41 , HIS B:58 , GLY B:59 , HOH B:301BINDING SITE FOR RESIDUE SO4 B 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RV2)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4RV2)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RV2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RV2)

(-) Exons   (0, 0)

(no "Exon" information available for 4RV2)

(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:135
                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eee....ee.hhhhhhhhhhhh...hhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhh........eeeeeeeee........eeeeeeeeeeee...eeeeeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rv2 A   7 IVGMHYRYPDFYEVGREKIREHALAIKNDETYFYDEDAAAELGHDALPAPLTFICIFGYQAQSAFFDHADIGVREAKIVQVDQELKFFKPIKAGDRLYCDVYVHAVRRADIIVTKNIITNDAGEIVQEAYTTLAG 144
                                    16        26        36        46        56        66        76        86        96       106       119       129       139     
                                                                                                                                      115|                         
                                                                                                                                       119                         


Chain B from PDB  Type:PROTEIN  Length:141
                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhh....eeeeeeeeehhhhhhhhhhhhh..hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhh.eeeeeee.............eeeeeeeeeeeee....eeeeeeeeee..ee....eeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rv2 B   2 ALREFSSVKVGDTLPERVITLTRGDLVNYAGVSGDLNPIHWDDEIAKQVGLDTAIAHGMLTMGLGGGYVTSWVGDPAAVTEYNVRFTAVVPVPNDGVGAEITFNGRVKSVDAEEKLVTIAISATAGGKKIFGRAVATARLA 142
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RV2)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RV2)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4RV2)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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