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(-) Description

Title :  CRYSTAL STRUCTURE OF HRASLS3/LRAT CHIMERIC PROTEIN
 
Authors :  M. Golczak, P. D. Kiser, A. E. Sears, K. Palczewski
Date :  29 Apr 14  (Deposition) - 29 Oct 14  (Release) - 25 Feb 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  A,B  (2x)
Keywords :  Lecithin:Retinol Acyltransferase, Alpha/Beta Fold, Acylation, Membrane, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Golczak, A. E. Sears, P. D. Kiser, K. Palczewski
Lrat-Specific Domain Facilitates Vitamin A Metabolism By Domain Swapping In Hrasls3.
Nat. Chem. Biol. V. 11 26 2015
PubMed-ID: 25383759  |  Reference-DOI: 10.1038/NCHEMBIO.1687

(-) Compounds

Molecule 1 - HRAS-LIKE SUPPRESSOR 3, LECITHIN RETINOL ACYLTRANSFERASE
    Chains: A, B
    EC Number: 2.3.1.135
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PGEX-2T
    Expression System Strain: BL21DE
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: HRASLS3, HREV107, HUMAN PLA2G16 AND MOUSE LRAT, LRAT, PLA2G16
    Organism Common: HUMAN, MOUSE
    Organism Scientific: HOMO SAPIENS, MUS MUSCULUS
    Organism Taxid: 9606, 10090
    Synonym: HRSL3, ADIPOSE-SPECIFIC PHOSPHOLIPASE A2, ADPLA, GROUP XVI PHOSPHOLIPASE A1/A2, H-REV 107 PROTEIN HOMOLOG, HRAS-LIKE SUPPRESSOR 1, HREV107-1, HREV107-3, RENAL CARCINOMA ANTIGEN NY-REN-65, PHOSPHATIDYLCHOLINE--RETINOL O-ACYLTRANSFERASE, PHOSPHATIDYLCHOLINE- RETINOL-O-ACYLTRANSFERASE

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): AB
Biological Unit 2 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1SHV2Ligand/IonHEPTANOIC ACID
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1SHV2Ligand/IonHEPTANOIC ACID
Biological Unit 2 (1, 4)
No.NameCountTypeFull Name
1SHV4Ligand/IonHEPTANOIC ACID

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:120 , CYS A:125 , TYR B:22 , HIS B:24 , TRP B:25BINDING SITE FOR RESIDUE SHV A 201
2AC2SOFTWARETYR A:22 , HIS A:24 , TRP A:25 , LEU B:63 , VAL B:65 , THR B:121 , CYS B:125BINDING SITE FOR RESIDUE SHV B 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4Q95)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4Q95)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4Q95)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4Q95)

(-) Exons   (0, 0)

(no "Exon" information available for 4Q95)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:141
                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeee....eeeeeeee..eeeeeeeeeeeeeee...hhhhh......eeeeeeeeeeeeeeehhhhhh...eee...........hhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhhh........ee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q95 A   7 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPDILLALTNDKERTQKVVSNKRLLLGVICKVAIVKKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVARSDQEFIVTD 147
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146 


Chain B from PDB  Type:PROTEIN  Length:127
                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeeee....eeeeeeee..eeeeeeeeeeeeeeee....eeeeeeeeeeeeeeehhhhhh...eee...........hhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q95 B   5 PIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPDILLALTNDKERLLLGVICKVAIVKKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVARSD 140
                                    14        24        34        44     || 63        73        83        93       103       113       123       133       
                                                                        50|                                                                                
                                                                         60
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4Q95)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4Q95)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4Q95)

(-) Gene Ontology  (41, 46)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

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        PA216_HUMAN | P53816: 2kyt 4dot 4fa0

(-) Related Entries Specified in the PDB File

4dot