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(-) Description

Title :  MULTIPLE CRYSTAL STRUCTURES OF AN ALL-AT DNA DODECAMER STABILIZED BY WEAK INTERACTIONS.
 
Authors :  F. Acosta-Reyes, J. A. Subirana, J. Pous, N. Condom, L. Malinina, J. L. C
Date :  07 Nov 12  (Deposition) - 20 Nov 13  (Release) - 25 Feb 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.10
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Oligonucleotide, Weak Interactions, B Form Dna, Dna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. J. Acosta-Reyes, J. A. Subirana, J. Pous, R. Sanchez-Giraldo, N. Condom, R. Baldini, L. Malinina, J. L. Campos
Polymorphic Crystal Structures Of An All-At Dna Dodecamer.
Biopolymers V. 103 123 2015
PubMed-ID: 25257185  |  Reference-DOI: 10.1002/BIP.22565

(-) Compounds

Molecule 1 - DNA (5'-D(*AP*AP*TP*AP*AP*AP*TP*TP*TP*AP*TP*T)-3')
    Chains: A, B, C, D
    Engineered: YES
    Other Details: DNA OLIGONUCLEOTIDE.
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1MG1Ligand/IonMAGNESIUM ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREDA B:16 , HOH B:201 , HOH B:202 , HOH C:101BINDING SITE FOR RESIDUE MG B 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4HW1)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:DNA  Length:12
                                           
                  4hw1 A  1 AATAAATTTATT 12
                                    10  


Chain B from PDB  Type:DNA  Length:12
                                           
                  4hw1 B 13 AATAAATTTATT 24
                                    22  


Chain C from PDB  Type:DNA  Length:12
                                           
                  4hw1 C  1 AATAAATTTATT 12
                                    10  


Chain D from PDB  Type:DNA  Length:12
                                           
                  4hw1 D 13 AATAAATTTATT 24
                                    22
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4HW1)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4HW1)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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  4hw1
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 Related Entries

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