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(-) Description

Title :  SOLUTION STRUCTURE OF THE CHIMERIC HYDROPHOBIN NCHI2
 
Authors :  Q. Ren, M. Sunde, A. H. Kwan
Date :  03 Jul 13  (Deposition) - 06 Aug 14  (Release) - 06 Aug 14  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Structural Protein, Self-Assembly, Amyloid, Interface, Chimera (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Q. Ren, I. Macindoe, M. Sunde, A. Kwan
Solution Structure Of The Chimeric Hydrophobin Nchi2
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - NCHI2, HYDROPHOBIN, NCHI2
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPHUE
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    Organism ScientificNEUROSPORA CRASSA, NEUROSPORA CRASSA
    Organism Taxid5141, 5141
    Other DetailsTHE FIRST RESIDUE (S) OF THE CONSTRUCT IS A CLONING ARTEFACT. THE FIRST RESIDUE OF THE MATURE PROTEIN AFTER SIGNAL PEPTIDE CLEAVAGE (A) IS MISSING. THIS IS A CHIMERIC PROTEIN OF NC2 (UNIPROT Q7S3P5, RESIDUES 19-80 AND 91-97) AND EAS (UNIPROT Q04571, RESIDUES 88-105)
    Other Details - SourceARTIFICIAL CHIMERIC PROTEIN, SEE DETAILS IN MOLECULE SECTION.
    Strain4R74A, 4R74A
    SynonymRODLET PROTEIN

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x)A
NMR Structure * (1x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4BWH)

(-) Sites  (0, 0)

(no "Site" information available for 4BWH)

(-) SS Bonds  (4, 4)

NMR Structure
No.Residues
1A:14 -A:62
2A:23 -A:53
3A:24 -A:36
4A:63 -A:82

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4BWH)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4BWH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4BWH)

(-) Exons   (0, 0)

(no "Exon" information available for 4BWH)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:88
 aligned with Q7S3P5_NEUCR | Q7S3P5 from UniProtKB/TrEMBL  Length:97

    Alignment length:88
                                                                                                       90           
                                                                                                 88   89|   91      
                                    27        37        47        57        67        77        87|    ||  - |      
          Q7S3P5_NEUCR   18 APAAMERQVPYTPCSGLYGTAQCCATDVLGVADLDCANPPATLANATHFESTCAAIGQRARCCVLPILGQD----IL----CQTPAGL 97
               SCOP domains ---------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................eeeee.......eeeee.......hhhhhhhhhhh....eee...........eeeee.......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------- Transcript
                  4bwh A  1 SPAAMERQVPYTPCSGLYGTAQCCATDVLGVADLDCANPPATLANATHFESTCAAIGQRARCCKDDVTNTGNSFLIINAANCQTPAGL 88
                                    10        20        30        40        50        60        70        80        

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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4BWH)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4BWH)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4BWH)

(-) Gene Ontology  (5, 6)

NMR Structure(hide GO term definitions)
Chain A   (Q7S3P5_NEUCR | Q7S3P5)
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RODL_NEUCR | Q045712fmc 2k6a 2lfn
UniProtKB/TrEMBL
        Q7S3P5_NEUCR | Q7S3P54aog

(-) Related Entries Specified in the PDB File

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