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(-) Description

Title :  TUBR FROM BACILLUS MEGATERIUM PBM400
 
Authors :  C. H. S. Aylett, J. Lowe
Date :  02 May 12  (Deposition) - 03 Oct 12  (Release) - 24 Oct 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.50
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C  (2x)
Keywords :  Transcription, Tubulin, Ftsz, Segregation, Partition (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. H. S. Aylett, J. Lowe
Superstructure Of The Centromeric Complex Of Tubzrc Plasmid Partitioning Systems.
Proc. Natl. Acad. Sci. Usa V. 109 16522 2012
PubMed-ID: 23010931  |  Reference-DOI: 10.1073/PNAS.1210899109

(-) Compounds

Molecule 1 - TUBR
    Atcc: 12872
    Chains: A, B, C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PHIS17
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: C41
    Expression System Vector Type: PLASMID
    Organism Scientific: BACILLUS MEGATERIUM
    Organism Taxid: 1404
    Strain: QMB 1551

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit : ABC
Biological Unit 1 (1x): AB 
Biological Unit 2 (2x):   C

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric Unit (1, 3)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 4ASN)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4ASN)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4ASN)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4ASN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4ASN)

(-) Exons   (0, 0)

(no "Exon" information available for 4ASN)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:90
 aligned with Q848W2_BACMQ | Q848W2 from UniProtKB/TrEMBL  Length:101

    Alignment length:90
                                    11        21        31        41        51        61        71        81        91
          Q848W2_BACMQ    2 SDYFEEVMRKLTIEDVSILGWLFQNEANAVFKAIKKSSIADELEYSTANFRKTLNKLEAIHFIGTVTGGKEHKLYLTEYGQQAVQQAIHH 91
               SCOP domains ------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhh.hhhhhhhhhhhhhh...hhhhheehhhhhh.....hhhhhhhhhhhhhh..eeee......eeeehhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                  4asn A  2 SDYFEEVmRKLTIEDVSILGWLFQNEANAVFKAIKKSSIADELEYSTANFRKTLNKLEAIHFIGTVTGGKEHKLYLTEYGQQAVQQAIHH 91
                                   |11        21        31        41        51        61        71        81        91
                                   9-MSE                                                                              


Chain B from PDB  Type:PROTEIN  Length:90
 aligned with Q848W2_BACMQ | Q848W2 from UniProtKB/TrEMBL  Length:101

    Alignment length:90
                                    11        21        31        41        51        61        71        81        91
          Q848W2_BACMQ    2 SDYFEEVMRKLTIEDVSILGWLFQNEANAVFKAIKKSSIADELEYSTANFRKTLNKLEAIHFIGTVTGGKEHKLYLTEYGQQAVQQAIHH 91
               SCOP domains ------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhh.hhhhhhhhhhhhhh...hhhhheehhhhhh.....hhhhhhhhhhhhhh..eeee......eeeehhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                  4asn B  2 SDYFEEVmRKLTIEDVSILGWLFQNEANAVFKAIKKSSIADELEYSTANFRKTLNKLEAIHFIGTVTGGKEHKLYLTEYGQQAVQQAIHH 91
                                   |11        21        31        41        51        61        71        81        91
                                   9-MSE                                                                              


Chain C from PDB  Type:PROTEIN  Length:90
 aligned with Q848W2_BACMQ | Q848W2 from UniProtKB/TrEMBL  Length:101

    Alignment length:90
                                    11        21        31        41        51        61        71        81        91
          Q848W2_BACMQ    2 SDYFEEVMRKLTIEDVSILGWLFQNEANAVFKAIKKSSIADELEYSTANFRKTLNKLEAIHFIGTVTGGKEHKLYLTEYGQQAVQQAIHH 91
               SCOP domains ------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhh.hhhhhhhhhhhhhh...hhhhheehhhhhh.....hhhhhhhhhhhhhh..eeee......eeeehhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                  4asn C  2 SDYFEEVmRKLTIEDVSILGWLFQNEANAVFKAIKKSSIADELEYSTANFRKTLNKLEAIHFIGTVTGGKEHKLYLTEYGQQAVQQAIHH 91
                                   |11        21        31        41        51        61        71        81        91
                                   9-MSE
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4ASN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4ASN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4ASN)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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 Related Entries

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(-) Related Entries Specified in the PDB File

4aso TUBR BOUND TO 24 BP OF TUBC FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS
4ass TUBR BOUND TO TUBC - 26 BP - FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS