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(-) Description

Title :  CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAINS OF THE BOVICOLA OVIS ECDYSONE RECEPTOR ECR/USP HETERODIMER (METHYLENE LACTAM CRYSTAL)
 
Authors :  B. Ren, T. S. Peat, V. A. Streltsov, M. Pollard, R. Fernley, J. Grusovin, S. Seabrook, P. Pilling, T. Phan, L. Lu, G. O. Lovrecz, L. D. Graham, R. J
Date :  18 Feb 14  (Deposition) - 30 Jul 14  (Release) - 30 Jul 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  E,U
Biol. Unit 1:  E,U  (1x)
Biol. Unit 2:  E,U  (2x)
Biol. Unit 3:  E (1x),U (1x)
Keywords :  Ecdysone Receptor, Usp, Methylene Lactam, Heterodimer, Ligand Binding Domain, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Ren, T. S. Peat, V. A. Streltsov, M. Pollard, R. Fernley, J. Grusovin S. Seabrook, P. Pilling, T. Phan, L. Lu, G. O. Lovrecz, L. D. Graham, R. J. Hill
Unprecedented Conformational Flexibility Revealed In The Ligand-Binding Domains Of The Bovicola Ovis Ecdysone Receptor (Ecr) And Ultraspiracle (Usp) Subunits.
Acta Crystallogr. , Sect. D V. 70 1954 2014
PubMed-ID: 25004972  |  Reference-DOI: 10.1107/S1399004714009626

(-) Compounds

Molecule 1 - ECDYSONE RECEPTOR
    Chains: E
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 281-514
    Gene: PHUM_PHUM467460
    Organism Common: BODY LOUSE
    Organism Scientific: PEDICULUS HUMANUS SUBSP. CORPORIS
    Organism Taxid: 121224
 
Molecule 2 - RETINOID X RECEPTOR
    Chains: U
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 222-415
    Gene: PHUM_PHUM164330
    Organism Common: BODY LOUSE
    Organism Scientific: PEDICULUS HUMANUS SUBSP. CORPORIS
    Organism Taxid: 121224

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : EU
Biological Unit 1 (1x): EU
Biological Unit 2 (2x): EU
Biological Unit 3 (1x): E (1x)U (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4OZR)

(-) Sites  (0, 0)

(no "Site" information available for 4OZR)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4OZR)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Val E:382 -Gly E:383
2Gly E:383 -Ser E:384
3Arg E:472 -Ser E:473
4Ser E:473 -Gly E:474

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4OZR)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4OZR)

(-) Exons   (0, 0)

(no "Exon" information available for 4OZR)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain E from PDB  Type:PROTEIN  Length:197
                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ozr E 282 KPISPEQEELIHRLVYFQNEYEQPSDEDFRHITEITILTVQLIVEFAKRLPGFDKLLREDQIALLKACSSEVMMLRMARRYDVGSDSILATVDDLLRFCRQMYGMKVDNAEYALLTAIVIFSERPSLIEGWKVEKIQEIYLEALKVYVDNRRKPRSGTIFAKLLSVLTELRTLGNLNSEMCFSLKLKNKKLPPFLAE 514
                                   291       301       329       339       349       359       369       379       407       417       427       437       447       457       467       477       487       497       507       
                                                     309|                                                         388|                                                                                                           
                                                      328                                                          407                                                                                                           


Chain U from PDB  Type:PROTEIN  Length:196
                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee.....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ozr U 194 AANAVANICQATNTQLYQLVEWAKHIPHFSSLPIEDQVLLLRAGWNELLIAAFSHRSVEVRDGIVLGAGITVHRNSAHQAGVGTIFDRVLTELVAKMRDMNMDRTELGSLRSIILFNPEVRGLKSGQEVELLREKVYAALEEYTRVTRPEEPGRFAKLLLRLPALRSIGLKCLEHLFFFRLIGDIPIDTFLMDMLG 389
                                   203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4OZR)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4OZR)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (13, 23)

Asymmetric Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Arg E:472 - Ser E:473   [ RasMol ]  
    Gly E:383 - Ser E:384   [ RasMol ]  
    Ser E:473 - Gly E:474   [ RasMol ]  
    Val E:382 - Gly E:383   [ RasMol ]  
 
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 Related Entries

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(-) Related Entries Specified in the PDB File

4ozt