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(-)Asym./Biol. Unit
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(-) Description

Title :  CRYSTAL STRUCTURE OF THE CIF EPOXIDE HYDROLASE FROM ACINETOBACTER NOSOCOMIALIS
 
Authors :  C. D. Bahl, D. R. Madden
Date :  25 Aug 13  (Deposition) - 05 Feb 14  (Release) - 02 Apr 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.95
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Alpha/Beta Hydrolase Fold, Epoxide Hydrolase, Secreted, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. D. Bahl, K. L. Hvorecny, A. A. Bridges, A. E. Ballok, J. M. Bomberger, K. C. Cady, G. A. O'Toole, D. R. Madden
Signature Motifs Identify An Acinetobacter Cif Virulence Factor With Epoxide Hydrolase Activity.
J. Biol. Chem. V. 289 7460 2014
PubMed-ID: 24474692  |  Reference-DOI: 10.1074/JBC.M113.518092

(-) Compounds

Molecule 1 - PREDICTED PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMQ70
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 25-349
    Gene: ACIF, HMPREF0014_00517
    Organism Scientific: ACINETOBACTER SP. RUH2624
    Organism Taxid: 575564

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4MEA)

(-) Sites  (0, 0)

(no "Site" information available for 4MEA)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MEA)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Gly A:150 -Pro A:151
2Gly B:150 -Pro B:151

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MEA)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4MEA)

(-) Exons   (0, 0)

(no "Exon" information available for 4MEA)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:324
                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhh.hhhhh....eeeeeeee..eeeeeeee......eeee.....hhhhhhhhhhhhh....eeee................hhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhhhh...eeeeeee.....hhhhhh...ee..ee..hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeee.....hhhhhhhhhhh..hhh.eeeeee.....hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4mea A  25 EYDPNLKSIDTPPAVSQQMFNKVKSNGLGQYAYAKGLSSKFIESEGVKLHYVEGGSKGTPIVFIHGFGSTWKMWEPVMLSYMKDHKVIAIDLPGLGQSGPILNDDYSAENTSKILIGAIKKIAGKGPIYYVSHDLGNTASYPLVANNQGYIKKAVFMDSPIPDRAMFEYPGYTADGPGLGWHFGYFSFGDIAEKQIANDPNLFFSYFIKTYAGKKEIFTPELLAELIEPYSTRDKLKAAFGYYRSHADSIRQNEALLANGKKLTIPSMALTGQKGVNDVLVKEMRARFVADPAQYTAIILPDTGHWMVEENAEGVEKSLSNFLF 348
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344    


Chain B from PDB  Type:PROTEIN  Length:323
                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhh.hhhhh.....eeeeeee..eeeeeeee......eeee.....hhhhhhhhhhhhh....eeee................hhhhhhhhhhhhhhhhhh...eeeeeehhhhhhhhhhhhhh...eeeeeee.....hhhhhh...ee..ee..hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeee.....hhhhhhhhhhh..hhh.eeeeee.....hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mea B  26 YDPNLKSIDTPPAVSQQMFNKVKSNGLGQYAYAKGLSSKFIESEGVKLHYVEGGSKGTPIVFIHGFGSTWKMWEPVMLSYMKDHKVIAIDLPGLGQSGPILNDDYSAENTSKILIGAIKKIAGKGPIYYVSHDLGNTASYPLVANNQGYIKKAVFMDSPIPDRAMFEYPGYTADGPGLGWHFGYFSFGDIAEKQIANDPNLFFSYFIKTYAGKKEIFTPELLAELIEPYSTRDKLKAAFGYYRSHADSIRQNEALLANGKKLTIPSMALTGQKGVNDVLVKEMRARFVADPAQYTAIILPDTGHWMVEENAEGVEKSLSNFLF 348
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MEA)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MEA)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MEA)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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  Cis Peptide Bonds
    Gly A:150 - Pro A:151   [ RasMol ]  
    Gly B:150 - Pro B:151   [ RasMol ]  
 

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 Related Entries

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(-) Related Entries Specified in the PDB File

3kd2 HOMOLOGUE FROM PSEUDOMONAS AERUGINOSA PA14
4meb