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(-) Description

Title :  CRYSTAL STRUCTURE OF BTRN IN COMPLEX WITH ADOMET AND 2-DOIA
 
Authors :  C. L. Drennan, P. J. Goldman
Date :  12 Aug 13  (Deposition) - 02 Oct 13  (Release) - 05 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.56
Chains :  Asym./Biol. Unit :  A
Keywords :  Adomet Radical Fold, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. J. Goldman, T. L. Grove, S. J. Booker, C. L. Drennan
X-Ray Analysis Of Butirosin Biosynthetic Enzyme Btrn Redefines Structural Motifs For Adomet Radical Chemistry.
Proc. Natl. Acad. Sci. Usa V. 110 15949 2013
PubMed-ID: 24048029  |  Reference-DOI: 10.1073/PNAS.1312228110

(-) Compounds

Molecule 1 - BTRN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: BTRN
    Organism Scientific: BACILLUS CIRCULANS
    Organism Taxid: 1397
    Synonym: BTRN PROTEIN

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 5)

Asymmetric/Biological Unit (4, 5)
No.NameCountTypeFull Name
125W1Ligand/Ion(1R,2S,3S,4R,5S)-5-AMINOCYCLOHEXANE-1,2,3,4-TETROL
2GOL1Ligand/IonGLYCEROL
3SAM1Ligand/IonS-ADENOSYLMETHIONINE
4SF42Ligand/IonIRON/SULFUR CLUSTER

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:16 , ARG A:18 , CYS A:20 , CYS A:23 , ASN A:25 , TYR A:62 , ASN A:92 , HIS A:117 , SAM A:503BINDING SITE FOR RESIDUE SF4 A 501
2AC2SOFTWARECYS A:169 , PRO A:172 , CYS A:187 , ARG A:226 , LEU A:231 , CYS A:232 , CYS A:235BINDING SITE FOR RESIDUE SF4 A 502
3AC3SOFTWARETYR A:22 , HIS A:60 , PHE A:61 , GLY A:63 , TYR A:90 , THR A:91 , ASN A:92 , THR A:115 , HIS A:117 , LEU A:147 , VAL A:148 , LEU A:149 , SER A:150 , ARG A:152 , SF4 A:501 , 25W A:504 , HOH A:601 , HOH A:602 , HOH A:603 , HOH A:648BINDING SITE FOR RESIDUE SAM A 503
4AC4SOFTWAREGLU A:9 , ARG A:56 , HIS A:60 , TYR A:90 , ARG A:152 , PHE A:188 , TYR A:246 , VAL A:249 , SAM A:503 , HOH A:602 , HOH A:622 , HOH A:629BINDING SITE FOR RESIDUE 25W A 504
5AC5SOFTWARESER A:239 , VAL A:240 , GLN A:241 , THR A:242 , HOH A:697BINDING SITE FOR RESIDUE GOL A 505

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4M7T)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4M7T)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4M7T)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4M7T)

(-) Exons   (0, 0)

(no "Exon" information available for 4M7T)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:246
                                                                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......eeee............hhhhh.........hhhhhhhhhhhhhhh....eee.....hhhhh.hhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhh.eeeee.hhh..................hhhhheeee....eee............ee....hhhhhhhhhhhhhhhhhhhh.hhhhh..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4m7t A   1 MDKLFSMIEVEVNSQCNRTCWYCPNSVSKRKETGEMDPALYKTLMEQLSSLDFAGRISFHFYGEPLLCKNLDLFVGMTTEYIPRARPIIYTNGDFLTEKRLQTLTELGIQKFIVTQHAGAKHKFRGVYDQLAGADKEKVVYLDHSDLVLSNRGGILDNIPANMSCMVPSNLAVVTVLGNVLPCFEDFNQKMVMGNIGEQHISDIWHNDKFTSFRKMLKEGHRGKSDLCKNCNNVSVQTEEQYDYVL 250
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160|      174       184       194       204       214       224       234       244      
                                                                                                                                                                                         160|                                                                                     
                                                                                                                                                                                          165
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4M7T)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4M7T)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4M7T)

(-) Gene Ontology  (7, 7)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
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  4m7t
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  BTRN_BACCI | Q8G907
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 Related Entries

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UniProtKB/Swiss-Prot
        BTRN_BACCI | Q8G907: 4m7s

(-) Related Entries Specified in the PDB File

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