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(-) Description

Title :  CRYSTAL STRUCTURE OF A 6-HELIX COILED COIL CC-HEX-L17C-W224BF
 
Authors :  A. J. Burton, C. Agnew, R. L. Brady, D. N. Woolfson
Date :  23 May 13  (Deposition) - 21 Aug 13  (Release) - 11 Sep 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A,B,C  (2x)
Keywords :  De Novo Coiled-Coil Assembly, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. J. Burton, F. Thomas, C. Agnew, K. L. Hudson, S. E. Halford, R. L. Brady, D. N. Woolfson
Accessibility, Reactivity, And Selectivity Of Side Chains Within A Channel Of De Novo Peptide Assembly.
J. Am. Chem. Soc. V. 135 12524 2013
PubMed-ID: 23924058  |  Reference-DOI: 10.1021/JA4053027

(-) Compounds

Molecule 1 - 6-HELIX COILED COIL CC-HEX-L17C-W224BF
    Chains: A, B, C
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit : ABC
Biological Unit 1 (2x): ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 7)

Asymmetric Unit (3, 7)
No.NameCountTypeFull Name
14BF3Mod. Amino Acid4-BROMO-L-PHENYLALANINE
2ACE3Mod. Amino AcidACETYL GROUP
3GOL1Ligand/IonGLYCEROL
Biological Unit 1 (3, 14)
No.NameCountTypeFull Name
14BF6Mod. Amino Acid4-BROMO-L-PHENYLALANINE
2ACE6Mod. Amino AcidACETYL GROUP
3GOL2Ligand/IonGLYCEROL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:19 , 4BF A:22 , GLU A:23 , HOH A:217 , HOH A:221BINDING SITE FOR RESIDUE GOL A 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4KVU)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4KVU)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4KVU)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4KVU)

(-) Exons   (0, 0)

(no "Exon" information available for 4KVU)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  4kvu A  0 xGELKAIAQELKAIAKECKAIAyELKAIAQ 29
                            |        9        19  |     29
                            |                    22-4BF   
                            0-ACE                         


Chain B from PDB  Type:PROTEIN  Length:31
                                                              
               SCOP domains ------------------------------- SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains ------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                  4kvu B  0 xGELKAIAQELKAIAKECKAIAyELKAIAQG 30
                            |        9        19  |     29 
                            0-ACE                22-4BF    


Chain C from PDB  Type:PROTEIN  Length:28
                                                           
               SCOP domains ---------------------------- SCOP domains
               CATH domains ---------------------------- CATH domains
               Pfam domains ---------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------- SAPs(SNPs)
                    PROSITE ---------------------------- PROSITE
                 Transcript ---------------------------- Transcript
                  4kvu C  0 xGELKAIAQELKAIAKECKAIAyELKAI 27
                            |        9        19  |     
                            0-ACE                22-4BF
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4KVU)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4KVU)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4KVU)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4KVU)

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  4kvu
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

4kvt CRYSTAL STRUCTURE OF A 6-HELIX COILED COIL CC-HEX-L24C
4kvv CRYSTAL STRUCTURE OF AN ALKYLATED CYS MUTANT OF CC-HEX