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(-) Description

Title :  GCN4PLI DERIVATIVE WITH ALPHA/BETA/CYCLIC-GAMMA AMINO ACID SUBSTITUTION PATTERN
 
Authors :  Y. H. Shin, D. E. Mortenson, K. A. Satyshur, K. T. Forest, S. H. Gellman
Date :  12 Oct 12  (Deposition) - 12 Jun 13  (Release) - 19 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.25
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,C  (2x)
Biol. Unit 2:  B,D  (2x)
Keywords :  Alpha/Beta/Gamma Amino Acid, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. H. Shin, D. E. Mortenson, K. A. Satyshur, K. T. Forest, S. H. Gellman
Differential Impact Of Beta And Gamma Residue Preorganization On Alpha / Beta / Gamma-Peptide Helix Stability In Water.
J. Am. Chem. Soc. V. 135 8149 2013
PubMed-ID: 23701135  |  Reference-DOI: 10.1021/JA403319Q

(-) Compounds

Molecule 1 - GCN4PLI(ALPHA/BETA/CYCLIC-GAMMA)
    Chains: C, A, B, D
    Engineered: YES
    Other Details: GENERATED VIA SOLID-PHASE PEPTIDE SYNTHESIS.
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (2x): A C 
Biological Unit 2 (2x):  B D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 16)

Asymmetric Unit (3, 16)
No.NameCountTypeFull Name
1ACE4Mod. Amino AcidACETYL GROUP
2GM84Mod. Amino Acid(2S)-2-[(1S,2S)-2-AMINOCYCLOHEXYL]BUTANOIC ACID
3XPC8Mod. Amino Acid(3S,4R)-4-AMINOPYRROLIDINE-3-CARBOXYLIC ACID
Biological Unit 1 (3, 16)
No.NameCountTypeFull Name
1ACE4Mod. Amino AcidACETYL GROUP
2GM84Mod. Amino Acid(2S)-2-[(1S,2S)-2-AMINOCYCLOHEXYL]BUTANOIC ACID
3XPC8Mod. Amino Acid(3S,4R)-4-AMINOPYRROLIDINE-3-CARBOXYLIC ACID
Biological Unit 2 (3, 16)
No.NameCountTypeFull Name
1ACE4Mod. Amino AcidACETYL GROUP
2GM84Mod. Amino Acid(2S)-2-[(1S,2S)-2-AMINOCYCLOHEXYL]BUTANOIC ACID
3XPC8Mod. Amino Acid(3S,4R)-4-AMINOPYRROLIDINE-3-CARBOXYLIC ACID

(-) Sites  (0, 0)

(no "Site" information available for 4HJB)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4HJB)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4HJB)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:31
                                                              
               SCOP domains ------------------------------- SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains ------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                  4hjb A  0 xRMKQIEDKLEEILSKLYHIExELxIKxLLG 30
                            |        9        19 |  |  |29 
                            |                   21-XPC |   
                            0-ACE                  24-GM8  
                                                      27-XPC


Chain B from PDB  Type:PROTEIN  Length:31
                                                              
               SCOP domains ------------------------------- SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains ------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                  4hjb B  0 xRMKQIEDKLEEILSKLYHIExELxIKxLLG 30
                            |        9        19 |  |  |29 
                            |                   21-XPC |   
                            0-ACE                  24-GM8  
                                                      27-XPC


Chain C from PDB  Type:PROTEIN  Length:31
                                                              
               SCOP domains ------------------------------- SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains ------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                  4hjb C  0 xRMKQIEDKLEEILSKLYHIExELxIKxLLG 30
                            |        9        19 |  |  |29 
                            |                   21-XPC |   
                            0-ACE                  24-GM8  
                                                      27-XPC


Chain D from PDB  Type:PROTEIN  Length:31
                                                              
               SCOP domains ------------------------------- SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains ------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                  4hjb D  0 xRMKQIEDKLEEILSKLYHIExELxIKxLLG 30
                            |        9        19 |  |  |29 
                            |                   21-XPC |   
                            0-ACE                  24-GM8  
                                                      27-XPC
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4HJB)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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4hjd