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(-) Description

Title :  X-RAY CRYSTAL STRUCTURE OF THE ANCESTRAL 3-KETO STEROID RECEPTOR - DOC COMPLEX
 
Authors :  E. A. Ortlund, J. K. Colucci, J. Thornton, G. Eick, M. Harms
Date :  19 Jun 12  (Deposition) - 12 Dec 12  (Release) - 12 Dec 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.78
Chains :  Asym./Biol. Unit :  A
Keywords :  Nuclear Receptor, Steroid Receptor, Hormone, Doc, Deoxycorticosterone, Cytosolic, Steroid-Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. N. Eick, J. K. Colucci, M. J. Harms, E. A. Ortlund, J. W. Thornton
Evolution Of Minimal Specificity And Promiscuity In Steroid Hormone Receptors.
Plos Genet V. 8 03072 2012
PubMed-ID: 23166518  |  Reference-DOI: 10.1371/JOURNAL.PGEN.1003072

(-) Compounds

Molecule 1 - STEROID RECEPTOR 2
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 7)

Asymmetric/Biological Unit (5, 7)
No.NameCountTypeFull Name
11CA1Ligand/IonDESOXYCORTICOSTERONE
2CPS1Ligand/Ion3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE
3GOL2Ligand/IonGLYCEROL
4MES1Ligand/Ion2-(N-MORPHOLINO)-ETHANESULFONIC ACID
5SO42Ligand/IonSULFATE ION

(-) Sites  (7, 7)

Asymmetric Unit (7, 7)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:34 , ASN A:35 , GLN A:41 , MET A:75 , MET A:79 , ARG A:82 , MET A:110 , PHE A:206 , CYS A:207 , THR A:210BINDING SITE FOR RESIDUE 1CA A 301
2AC2SOFTWARELYS A:152 , SER A:153 , ALA A:155 , SER A:156BINDING SITE FOR RESIDUE SO4 A 302
3AC3SOFTWARELYS A:85 , THR A:130 , GLN A:131 , GLU A:132BINDING SITE FOR RESIDUE SO4 A 303
4AC4SOFTWAREASN A:169BINDING SITE FOR RESIDUE GOL A 304
5AC5SOFTWAREPRO A:12 , VAL A:14 , ARG A:56 , HIS A:86 , HOH A:429BINDING SITE FOR RESIDUE GOL A 305
6AC6SOFTWAREMET A:64 , GLN A:68 , MET A:224 , GLU A:227BINDING SITE FOR RESIDUE MES A 306
7AC7SOFTWAREGLN A:213 , LEU A:237BINDING SITE FOR RESIDUE CPS A 307

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4FNE)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4FNE)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4FNE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4FNE)

(-) Exons   (0, 0)

(no "Exon" information available for 4FNE)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:248
                                                                                                                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee..eeehhhhhhhh.hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.eee.....hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh..eee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fne A  -1 NAPSLISILQAIEPEVVYAGYDNTQPDTTNYLLSSLNRLAEKQLVSVVKWAKALPGFRNLHLDDQMTLIQYSWMGLMAFAMGWRSYKHTNGQMLYFAPDLIFNEQRMQQSAMYDLCQGMQQISQEFVRLQVTQEEFLCMKALLLLSTVPKEGLKSQASFDEMRMNYIKELNRAIAKKENNSAQNWQRFYQLTKLLDSMHDLVGGLLQFCFYTFVQSQALSVEFPEMLVEIISAQLPKVLAGMAKPLLF 246
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4FNE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4FNE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4FNE)

(-) Gene Ontology  (0, 0)

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(-) Related Entries Specified in the PDB File

4fn9 X-RAY CRYSTAL STRUCTURE OF THE ANCESTRAL 3-KETO STEROID RECEPTOR - PROGESTERONE COMPLEX