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(-) Description

Title :  CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF THE BACILLUS CEREUS SLEB PROTEIN
 
Authors :  B. Hao
Date :  11 May 12  (Deposition) - 11 Jul 12  (Release) - 29 Aug 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.85
Chains :  Asym./Biol. Unit :  A
Keywords :  Hydrolase, Lytic Transglycosylase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Li, K. Jin, B. Setlow, P. Setlow, B. Hao
Crystal Structure Of The Catalytic Domain Of The Bacillus Cereus Sleb Protein, Important In Cortex Peptidoglycan Degradation During Spore Germination.
J. Bacteriol. V. 194 4537 2012
PubMed-ID: 22730118  |  Reference-DOI: 10.1128/JB.00877-12

(-) Compounds

Molecule 1 - SPORE CORTEX-LYTIC ENZYME
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: MODIFIED PET15B
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Fragment: THE CATALYTIC DOMAIN, UNP RESIDUES 136-259
    Gene: BC_2753, SLEB
    Organism Scientific: BACILLUS CEREUS
    Organism Taxid: 226900
    Strain: ATCC 14579/DSM 31
    Synonym: SCLE, GERMINATION-SPECIFIC AMIDASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric/Biological Unit (1, 3)
No.NameCountTypeFull Name
1PO43Ligand/IonPHOSPHATE ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN A:137 , PRO A:183 , ASN A:184 , GLU A:192BINDING SITE FOR RESIDUE PO4 A 301
2AC2SOFTWAREGLY A:132 , TYR A:232 , PHE A:233 , ASN A:234 , HIS A:255 , HOH A:458 , HOH A:476BINDING SITE FOR RESIDUE PO4 A 302
3AC3SOFTWAREASN A:175 , THR A:178 , SER A:179 , ASN A:228 , LEU A:230 , HOH A:541BINDING SITE FOR RESIDUE PO4 A 303

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4F55)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4F55)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4F55)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4F55)

(-) Exons   (0, 0)

(no "Exon" information available for 4F55)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:128
                                                                                                                                                                
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.....hhhhhhhh...hhhhhhh......hhhhhhhhhhhhh.........eee......hhhhhhh.eeeee..eeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4f55 A 132 GGGRTNVPNGYSQNDIQLMANAVYGESRGEPYLGQVAVAAVILNRVTSASFPNTVSGVIFEPRAFTAVADGQIYLTPNETAKKAVLDAINGWDPTGNALYYFNPDTATSKWIWTRPQIKKIGKHIFCK 259
                                   141       151       161       171       181       191       201       211       221       231       241       251
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4F55)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4F55)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4F55)

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)

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  4f55
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 Related Entries

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