3SC8 - JenaLib

Title :   CRYSTAL STRUCTURE OF AN INTRAMOLECULAR HUMAN TELOMERIC DNA G-QUADRUPLEX BOUND BY THE NAPHTHALENE DIIMIDE BMSG-SH-3

Authors :   G. W. Collie, R. Promontorio, G. N. Parkinson

Date :   07 Jun 11 (Deposition) - 15 Feb 12 (Release) - 22 Feb 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym./Biol. Unit : A

Keywords :   G-Quadruplex, Intramolecular, Ligand-Complex, Telomeric, Dna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   G. W. Collie, R. Promontorio, S. M. Hampel, M. Micco, S. Neidle, G. N. Parkinson
Structural Basis For Telomeric G-Quadruplex Targeting By Naphthalene Diimide Ligands.
J. Am. Chem. Soc. V. 134 2723 2012
PubMed-ID: 22280460 | Reference-DOI: 10.1021/JA2102423

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 4)

Sites (4, 4)

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	DG A:3 , DG A:4 , DG A:9 , DG A:10 , DG A:15 , DG A:16 , DG A:21 , DG A:22 , K A:25	BINDING SITE FOR RESIDUE K A 24
2	AC2	SOFTWARE	DG A:2 , DG A:3 , DG A:8 , DG A:9 , DG A:14 , DG A:15 , DG A:20 , DG A:21 , K A:24 , K A:26	BINDING SITE FOR RESIDUE K A 25
3	AC3	SOFTWARE	DG A:2 , DG A:8 , DG A:14 , DG A:20 , K A:25	BINDING SITE FOR RESIDUE K A 26
4	AC4	SOFTWARE	DG A:4 , DT A:5 , DT A:6 , DG A:10 , DT A:11 , DT A:12 , DA A:13 , DG A:16 , DG A:22	BINDING SITE FOR RESIDUE R8G A 23

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

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Chain A from PDB  Type:DNA  Length:21
                                                    
                  3sc8 A  2 GGGTTAGGGTTAGGGTTAGGG 22
                                    11        21

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Classification and Annotation

SCOP Domains (0, 0)

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Gene Ontology (0, 0)

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