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(-) Description

Title :  CRYSTAL STRUCTURE OF A PUTATIVE SUGAR-PHOSPHATE ISOMERASE (LMOF2365_0531) FROM LISTERIA MONOCYTOGENES STR. 4B F2365 AT 1.60 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  20 Jan 09  (Deposition) - 03 Feb 09  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Putative Sugar-Phosphate Isomerase (Yp_013136. 1) From Listeria Monocytogenes 4B F2365 At 1. 60 Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - SIS DOMAIN PROTEIN
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: HK100
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: LMOF2365_0531, YP_013136.1
    Organism Scientific: LISTERIA MONOCYTOGENES STR. 4B F2365
    Organism Taxid: 265669
    Strain: F2365, SEROTYPE 4B

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 22)

Asymmetric/Biological Unit (2, 22)
No.NameCountTypeFull Name
1EDO2Ligand/Ion1,2-ETHANEDIOL
2MSE20Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER B:55 , ILE B:98 , LYS B:100 , ALA B:155 , SER B:158 , THR B:159 , HOH B:222 , HOH B:298BINDING SITE FOR RESIDUE EDO B 201
2AC2SOFTWAREHIS A:188 , HIS D:83 , HOH D:348BINDING SITE FOR RESIDUE EDO D 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3FXA)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3FXA)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3FXA)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3FXA)

(-) Exons   (0, 0)

(no "Exon" information available for 3FXA)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:192
                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhh...eee.hhhhhhhhhhhhh....eeeee.....hhhhhhhhhhhhhhh.eeeeee....hhhhhhh.eeee.............hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3fxa A   1 mDKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNmLATASTmAVIASFDAVIVCLmTYmNYTKEQFSVIHPGGA 192
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150  |    160       170   |  |180       190  
                            |                                                                                                                                                     153-MSE  |           174-MSE              
                            1-MSE                                                                                                                                                        160-MSE          177-MSE           


Chain B from PDB  Type:PROTEIN  Length:191
                                                                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhh...eee.hhhhhhhhhhhhh....eeeee.....hhhhhhhhhhhhhhh.eeeeee....hhhhhhh.eeee.............hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fxa B   0 GmDKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNmLATASTmAVIASFDAVIVCLmTYmNYTKEQFSVIHPG 190
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149   |   159|      169    |  179       189 
                             1-MSE                                                                                                                                                 153-MSE  |           174-MSE            
                                                                                                                                                                                          160-MSE          177-MSE         


Chain C from PDB  Type:PROTEIN  Length:192
                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee.hhhhhhhhhhhhhhhhh...eee.hhhhhhhhhhhhh....eeeee.....hhhhhhhhhhhhhhh.eeeeee....hhhhhhh.eeee.............hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3fxa C   0 GmDKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNmLATASTmAVIASFDAVIVCLmTYmNYTKEQFSVIHPGG 191
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149   |   159|      169    |  179       189  
                             1-MSE                                                                                                                                                 153-MSE  |           174-MSE             
                                                                                                                                                                                          160-MSE          177-MSE          


Chain D from PDB  Type:PROTEIN  Length:191
                                                                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee.hhhhhhhhhhhhhhhhh...eee.hhhhhhhhhhhhh....eeeee.....hhhhhhhhhhhhhhh.eeeeee....hhhhhhh.eeee.............hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3fxa D   0 GmDKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNmLATASTmAVIASFDAVIVCLmTYmNYTKEQFSVIHPG 190
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149   |   159|      169    |  179       189 
                             1-MSE                                                                                                                                                 153-MSE  |           174-MSE            
                                                                                                                                                                                          160-MSE          177-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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