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(-) Description

Title :  STRUCTURE OF THE NATIVE RNA TRIDECAMER R(GCGUUUGAAACGC) AT 1.5 A (NATMN)
 
Authors :  Y. Timsit, S. Bombard
Date :  24 Aug 07  (Deposition) - 25 Sep 07  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Monovalent, Electrostatic, Asymmetry, Manganese, Rna (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Y. Timsit, S. Bombard
The 1. 3 A Structure Of The Tridecamer R(Gcguuugaaacgc)
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - RNA (5'- R(*GP*CP*GP*UP*UP*UP*GP*AP*AP*AP*CP*GP*C)-3')
    ChainsA, B
    EngineeredYES
    SyntheticYES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 5)

Asymmetric/Biological Unit (2, 5)
No.NameCountTypeFull Name
1MN1Ligand/IonMANGANESE (II) ION
2NA4Ligand/IonSODIUM ION

(-) Sites  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:RNA  Length:13
                                            
                  2r22 A  1 GCGUUUGAAACGC 13
                                    10   

Chain B from PDB  Type:RNA  Length:13
                                            
                  2r22 B 14 GCGUUUGAAACGC 26
                                    23   

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 Classification and Annotation

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 Related Entries

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(-) Related Entries Specified in the PDB File

2r1s BROMINATED TRIDECAMER R(GCGUU-BRU-GAAACGC), 3MM MNCL2, 2 MM MGCL2, RESOLUTION 1.4 A
2r20 BROMINATED TRIDECAMER R(GCGUU-BRU-GAAACGC), 5MM MNCL2, 5MM MGCL2, RESOLUTION 1.3 A
2r21 BROMINATED TRIDECAMER R(GCGUU-BRU-GAAACGC), 0.5 MM MNCL2, RESOLUTION 1.6 A