2Q1R - JenaLib

Title :   CRYSTAL STRUCTURE ANALYSIS OF THE RNA DODECAMER CGCGAAUUAGCG, WITH A G-A MISMATCH.

Authors :   F. Li, P. S. Pallan

Date :   25 May 07 (Deposition) - 30 Oct 07 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.12

Chains :   Asym. Unit : A
Biol. Unit 1: A  (2x)

Keywords :   G-A Mismatch, Rna, Rnai (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   F. Li, P. S. Pallan, M. A. Maier, K. G. Rajeev, S. L. Mathieu, C. Kreutz, Y. Fan, J. Sanghvi, R. Micura, E. Rozners, M. Manoharan, M. Egli
Crystal Structure, Stability And In Vitro Rnai Activity Of Oligoribonucleotides Containing The Ribo-Difluorotoluyl Nucleotide: Insights Into Substrate Requirements By The Human Risc Ago2 Enzyme.
Nucleic Acids Res. V. 35 6424 2007
PubMed-ID: 17881374 | Reference-DOI: 10.1093/NAR/GKM664
(for further references see the PDB file header)

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 2)

Sites (2, 2)

Asymmetric Unit (2, 2)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	HOH A:9005 , HOH A:9023 , HOH A:9024 , HOH A:9045 , HOH A:9046 , HOH A:9047	BINDING SITE FOR RESIDUE MG A 8001
2	AC2	SOFTWARE	HOH A:9001 , HOH A:9002 , HOH A:9009 , HOH A:9019 , HOH A:9021 , HOH A:9032	BINDING SITE FOR RESIDUE MG A 8002

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

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SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

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Chain A from PDB  Type:RNA  Length:12
                                             
                2q1r A 1001 CGCGAAUUAGCG 1012
                                  1010

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

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