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(-) Description

Title :  SOLUTION STRUCTURES OF A DNA DODECAMER DUPLEX
 
Authors :  D. Bhattacharyya, Y. Wu, S. Chaney, S. Campbell
Date :  30 Oct 06  (Deposition) - 12 Jun 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (15x)
Keywords :  Deoxyribonucleic Acid, Duplex, Dodecamer, Dna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Wu, D. Bhattacharyya, C. L. King, I. Baskerville-Abraham, S. -H. Huh, G. Boysen, J. A. Swenberg, B. Temple, S. L. Campbell, S. G. Chaney
Solution Structures Of A Dna Dodecamer Duplex With And Without A Cisplatin 1, 2-D(Gg) Intrastrand Cross-Link: Comparison With The Same Dna Duplex Containing An Oxaliplatin 1, 2-D(Gg) Intrastrand Cross-Link
Biochemistry V. 46 6477 2007
PubMed-ID: 17497831  |  Reference-DOI: 10.1021/BI062291F
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 5'-D(*CP*CP*TP*CP*AP*GP*GP*CP*CP*TP*CP*C)-3'
    Chains: A
    Engineered: YES
    Synthetic: YES
 
Molecule 2 - 5'-D(*GP*GP*AP*GP*GP*CP*CP*TP*GP*AP*GP*G)-3'
    Chains: B
    Engineered: YES
    Synthetic: YES

 Structural Features

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NMR Structure (15x): 

Summary Information (see also Sequences/Alignments below)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:DNA  Length:12
                                           
                  2nq4 A  1 CCTCAGGCCTCC 12
                                    10  


Chain B from PDB  Type:DNA  Length:12
                                           
                  2nq4 B 13 GGAGGCCTGAGG 24
                                    22
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2npw 2nq0 2nq1