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Title :   SOLUTION NMR STRUCTURE OF A TWO-BASE DNA BULGE COMPLEXED WITH AN ENEDIYNE CLEAVING ANALOG, 11 STRUCTURES

Authors :   A. Stassinopoulos, J. Ji, X. Gao, I. H. Goldberg

Date :   19 Jun 97 (Deposition) - 28 Jan 98 (Release) - 24 Feb 09 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A  (11x)

Keywords :   Dna, Bulge Dna, Enediyne Antibiotics Antitumor Agents, Carbohydrates, Bulge Binding Ligands, Deoxyribonucleic Acid (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Stassinopoulos, J. Ji, X. Gao, I. H. Goldberg
Solution Structure Of A Two-Base Dna Bulge Complexed With An Enediyne Cleaving Analog.
Science V. 272 1943 1996
PubMed-ID: 8658168
(for further references see the PDB file header)

Compounds

*Molecule 1 - DNA (5'- D(CPCPCPGPAPTPGPCPPGEGPCPAPAPTPTPCPGPGPG )-3')**
	Chains	:	A
	Engineered	:	YES
	Other Details	:	NEOCARZINOSTATIN CHROMOPHORE DERIVATIVE (NCSI-GB)-BULGE-D(CCCGATCG-LINKER-GCAATTCGGG) COMPLEX
	Synthetic	:	YES

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 1)

NMR Structure (1, 1)

No.	Name	Count	Type	Full Name
1	NCS	1	Ligand/Ion	SPIRO[[7-METHOXY-5-METHYL-1,2-DIHYDRO-NAPHTHALENE]-3,1'-[5-HYDROXY-9-[2-METHYLAMINO-2,6-DIDEOXYGALACTOPYRANOSYL-OXY]-5-(2-OXO-[1,3]DIOXOLAN-4-YL)-3A,5,9,9A-TETRAHYDRO-3H-1-OXA-CYCLOPENTA[A]-S-INDACEN-2-ONE]]

Sites (1, 1)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

NMR Structure

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Chain A from PDB  Type:DNA  Length:18
                                                 
                  2neo A  1 CCCGATGCGCAATTCGGG 18
                                    10

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Classification and Annotation

SCOP Domains (0, 0)

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Gene Ontology (0, 0)

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