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(-) Description

Title :  MAX1 PEPTIDE FIBRIL
 
Authors :  K. Nagy-Smith, E. Moore, J. Schneider, R. Tycko
Date :  30 Mar 15  (Deposition) - 29 Jul 15  (Release) - 26 Aug 15  (Revision)
Method :  SOLID-STATE NMR
Resolution :  NOT APPLICABLE
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H  (20x)
Biol. Unit 1:  A,B,C,D,E,F,G,H  (1x)
Keywords :  Designed Peptide, Hydrogel, Biomaterials, Amyloid-Like, Cross-Beta, Protein Fibril (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Nagy-Smith, E. Moore, J. Schneider, R. Tycko
Molecular Structure Of Monomorphic Peptide Fibrils Within A Kinetically Trapped Hydrogel Network.
Proc. Natl. Acad. Sci. Usa V. 112 9816 2015
PubMed-ID: 26216960  |  Reference-DOI: 10.1073/PNAS.1509313112

(-) Compounds

Molecule 1 - MAX1 PEPTIDE
    Chains: A, B, C, D, E, F, G, H
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit (20x): ABCDEFGH
Biological Unit 1 (1x): ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 16)

Asymmetric Unit (2, 16)
No.NameCountTypeFull Name
1DPR8Mod. Amino AcidD-PROLINE
2NH28Mod. Amino AcidAMINO GROUP
Biological Unit 1 (2, 16)
No.NameCountTypeFull Name
1DPR8Mod. Amino AcidD-PROLINE
2NH28Mod. Amino AcidAMINO GROUP

(-) Sites  (0, 0)

(no "Site" information available for 2N1E)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2N1E)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2N1E)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2N1E)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2N1E)

(-) Exons   (0, 0)

(no "Exon" information available for 2N1E)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:21
                                                    
               SCOP domains --------------------- SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author .eeeeeeee..eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                  2n1e A  1 VKVKVKVKVxPTKVKVKVKVx 21
                                    10        20|
                                    10-DPR     21-NH2


Chain B from PDB  Type:PROTEIN  Length:21
                                                    
               SCOP domains --------------------- SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author .eeeeeeee..eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                  2n1e B  1 VKVKVKVKVxPTKVKVKVKVx 21
                                    10        20|
                                    10-DPR     21-NH2


Chain C from PDB  Type:PROTEIN  Length:21
                                                    
               SCOP domains --------------------- SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author .eeeeeeee..eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                  2n1e C  1 VKVKVKVKVxPTKVKVKVKVx 21
                                    10        20|
                                    10-DPR     21-NH2


Chain D from PDB  Type:PROTEIN  Length:21
                                                    
               SCOP domains --------------------- SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author .eeeeeeee..eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                  2n1e D  1 VKVKVKVKVxPTKVKVKVKVx 21
                                    10        20|
                                    10-DPR     21-NH2


Chain E from PDB  Type:PROTEIN  Length:21
                                                    
               SCOP domains --------------------- SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author .eeeeeeee..eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                  2n1e E  1 VKVKVKVKVxPTKVKVKVKVx 21
                                    10        20|
                                    10-DPR     21-NH2


Chain F from PDB  Type:PROTEIN  Length:21
                                                    
               SCOP domains --------------------- SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author .eeeeeeee..eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                  2n1e F  1 VKVKVKVKVxPTKVKVKVKVx 21
                                    10        20|
                                    10-DPR     21-NH2


Chain G from PDB  Type:PROTEIN  Length:21
                                                    
               SCOP domains --------------------- SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author .eeeeeeee..eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                  2n1e G  1 VKVKVKVKVxPTKVKVKVKVx 21
                                    10        20|
                                    10-DPR     21-NH2


Chain H from PDB  Type:PROTEIN  Length:21
                                                    
               SCOP domains --------------------- SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author .eeeeeeee..eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                  2n1e H  1 VKVKVKVKVxPTKVKVKVKVx 21
                                    10        20|
                                    10-DPR     21-NH2
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2N1E)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2N1E)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2N1E)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 2N1E)

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 Related Entries

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