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(-) Description

Title :  STRUCTURE OF AN INTRAMOLECULAR G-QUADRUPLEX CONTAINING A G.C.G.C TETRAD FORMED BY HUMAN TELOMERIC VARIANT CTAGGG REPEATS
 
Authors :  K. W. Lim, P. Alberti, A. Guedin, L. Lacroix, J. F. Riou, N. J. Royle, J. L. Mergny, A. T. Phan
Date :  17 Jul 09  (Deposition) - 03 Nov 09  (Release) - 03 Nov 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
Keywords :  Anticancer Targets, Ctaggg Repeat, G-Quadruplex, Human Telomere Instability, Dna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. W. Lim, P. Alberti, A. Guedin, L. Lacroix, J. F. Riou, N. J. Royle, J. L. Mergny, A. T. Phan
Sequence Variant (Ctaggg)N In The Human Telomere Favors A G-Quadruplex Structure Containing A G. C. G. C Tetrad
Nucleic Acids Res. V. 37 6239 2009
PubMed-ID: 19692585  |  Reference-DOI: 10.1093/NAR/GKP630
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - DNA (5'- D(*AP*GP*GP*GP*CP*TP*AP*GP*GP*GP*CP*TP*AP*GP*GP*GP*CP*TP*AP *GP*GP*G)-3')
    Chains: A
    Engineered: YES
    Other Details: NUCLEOTIDE SYNTHESIS
    Synthetic: YES

 Structural Features

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NMR Structure (10x): 

Summary Information (see also Sequences/Alignments below)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:DNA  Length:22
                                                     
                  2km3 A  1 AGGGCTAGGGCTAGGGCTAGGG 22
                                    10        20
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

143d HUMAN TELOMERE DNA SOLUTION STRUCTURE IN THE PRESENCE OF NA
1k8p HUMAN TELOMERE DNA CRYSTAL STRUCTURE IN THE PRESENCE OF K
2aqy 3 REPEATS OF HUMAN TELOMERE DNA SOLUTION STRUCTURE
2gku END-MODIFIED HUMAN TELOMERE DNA CRYSTAL STRUCTURE IN THE PRESENCE OF K
2jsk HUMAN TELOMERE DNA SOLUTION STRUCTURE IN THE PRESENCE OF K CATIONS 16BRG FORM 1
2jsl HUMAN TELOMERE DNA SOLUTION STRUCTURE IN THE PRESENCE OF K CATIONS 16BRG FORM 1
2jsm HUMAN TELOMERE DNA SOLUTION STRUCTURE IN THE PRESENCE OF K CATIONS NATURAL FORM 1
2jsq HUMAN TELOMERE DNA SOLUTION STRUCTURE IN THE PRESENCE OF K CATIONS FORM 2 15BRG
2kf7 STRUCTURE OF A TWO-G-TETRAD BASKET-TYPE INTRAMOLECULAR G- QUADRUPLEX FORMED BY HUMAN TELOMERIC REPEATS IN K+ SOLUTION (7BRG)
2kf8 STRUCTURE OF A TWO-G-TETRAD BASKET-TYPE INTRAMOLECULAR G- QUADRUPLEX FORMED BY HUMAN TELOMERIC REPEATS IN K+ SOLUTION