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(-) Description

Title :  PLANTARICIN J IN DPC-MICELLES
 
Authors :  P. Rogne, C. Haugen, P. E. Kristiansen, J. Nissen-Meyer
Date :  03 Apr 09  (Deposition) - 30 Jun 09  (Release) - 30 Jun 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Anti-Microbial, Bacteriocin, Peptide, Two-Peptide, Antimicrobial Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Rogne, C. Haugen, G. Fimland, J. Nissen-Meyer, P. E. Kristiansen
Three-Dimensional Structure Of The Two-Peptide Bacteriocin Plantaricin Jk.
Peptides 2009
PubMed-ID: 19538999  |  Reference-DOI: 10.1016/J.PEPTIDES.2009.06.010
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PLNJ
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PGEV2
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: PLNJ, LP_0406
    Organism Scientific: LACTOBACILLUS PLANTARUM
    Organism Taxid: 1590
    Synonym: BACTERIOCIN PLNJ, BACTERIOCIN PEPTIDE PLNJ

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2KHF)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:25
 aligned with P71461_LACPN | P71461 from UniProtKB/TrEMBL  Length:55

    Alignment length:25
                                    40        50     
          P71461_LACPN   31 GAWKNFWSSLRKGFYDGEAGRAIRR 55
               SCOP domains ------------------------- SCOP domains
               CATH domains ------------------------- CATH domains
               Pfam domains ------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh.hhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------- SAPs(SNPs)
                    PROSITE ------------------------- PROSITE
                 Transcript ------------------------- Transcript
                  2khf A  1 GAWKNFWSSLRKGFYDGEAGRAIRR 25
                                    10        20
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 Classification and Annotation

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(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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  2khf
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 Related Entries

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        P71461_LACPN | P71461: 2khg

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