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(-) Description

Title :  NMR STRUCTURE OF A NEW MODIFIED THROMBIN BINDING APTAMER CONTAINING A 5'-5' INVERSION OF POLARITY SITE
 
Authors :  A. Randazzo, L. Martino, A. Virno, L. Mayol, C. Giancola
Date :  15 Sep 06  (Deposition) - 09 Jan 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (7x)
Keywords :  Inversion Of Polarity, Tba, Anticoagulant, Dna, Quadruplex, 5'-5' (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Martino, A. Virno, A. Randazzo, A. Virgilio, V. Esposito, C. Giancola, M. Bucci, G. Cirino, L. Mayol
A New Modified Thrombin Binding Aptamer Containing A 5'-5' Inversion Of Polarity Site.
Nucleic Acids Res. V. 34 6653 2006
PubMed-ID: 17145716  |  Reference-DOI: 10.1093/NAR/GKL915
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 3'-D(P*GP*G*T)-5'-5'- D(P*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3'
    Chains: A
    Engineered: YES
    Other Details: THE ORIGINAL SEQUENCE (THE ONE WITHOUT INVERSION OF POLARITY) HAS BEEN SELECTED IN THE SELEX PROCESS
    Synthetic: YES

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NMR Structure (7x): 

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NMR Structure
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Chain A from PDB  Type:DNA  Length:15
                                              
                  2idn A  1 GGTTGGTGTGGTTGG 15
                                    10
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