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(-) Description

Title :  ZEBRAFISH D-AMINO ACID OXIDASE
 
Authors :  P. Bhattacharya, A. Lynn, N. Subharao
Date :  19 Aug 06  (Deposition) - 12 Sep 06  (Release) - 12 Sep 06  (Revision)
Method :  THEORETICAL MODEL
Resolution :  NOT APPLICABLE
Chains :  Theor. Model :  _
Keywords :  Fad; Flavoprotein; Oxidoreductase; Peroxisome. (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Bhattacharya, School Of Life Sciences, Jawaharlal Nehru University, New Delhi-110067, India, Tel:91-011-2670-4523, Fax:91-011-2618-7338
Comparative Protein Modelling
Thesis V. 0 0 2006
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - METHIONINE
    Chains: _
    EC Number: EC No.1.4.3.3.
    Engineered: YES
    Fragment: D-AMINO ACID OXIDASE [DANIO RERIO]
    Mutation: YES
    Other Details: 0
    Synthetic: YES

 Structural Features

(-) Chains, Units

  
Theoretical Model : 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2I3N)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Theoretical Model
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain _ from PDB  Type:PROTEIN  Length:339
                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..hhhhhhhhhhhhhhhh......eeeeee..hhhhhhhhhh.............hhhhhhhhhhhhhhhh......hhhh.eeeeeeeeee.............eeeee.hhhhhh......eeeeeeeeeehhhhhhhhhhhhhhhh..eeee....hhhhhhhh...eeee.hhhhhhhhh.....eeeeeeeeeee......eeeeehhhhh.....eeee....eeee...ee.......hhhhhhhhhhhhhhhhhhhhhheeeeeeeeeeee....eeeeeee......eeeeeee....hhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2i3n _   1 MKVCIIGAGVIGLSTAQSIYQHFHSRVSPLTIEVYADIFTPLTTSDGAAGLWQPYLYDKGNVKETQWNKDTFNYLLSFINSPDSVKMGIFLQSGYNLCAEPMPEPSFKQAVLGFRQLSKRELEMFPGYSFGWFNTALMIEGKTYLPWLMNWLKQRGVTFFQRTIDSFKELSDSGADMIINCSGVRSGDLQPDPELQPARGQIIKVDAPWLKHWVITHDSTSGVYDSPYIIPGSRLVTVGGVFQVGNWNRMNSSVDHKGIWEAACKLEPSLQHARIVEDWTGLRPARSKVRLEREAIRSGGHSFEVIHNYGHGGFGLTIHRGCAEEAARLFGQFLEQKGL 339
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2I3N)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Theoretical Model(hide GO term definitions)
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 Related Entries

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