2GY4 - JenaLib

Title :   MODEL STRUCTURE OF DNA DODECAMER D(CGCGAATTCGCG)2 BOUND TO 1,4-BIS[5-(5-(2-IMIDAZOLINYL)-2 BENZIMIDAZOLYL)-2-BENZIMIDAZOLYL]BUTANE

Authors :   Saher A Shaikh

Date :   09 May 06 (Deposition) - 17 Oct 06 (Release) - 17 Oct 06 (Revision)

Method :   THEORETICAL MODEL

Resolution :   NOT APPLICABLE

Chains :   Theor. Model : A,B,_^#
( ^#: chains that contain no standard or modified protein/DNA/RNA residue)

Keywords :   Model Built, Minor Groove Binding, Dna-Drug, Benzimidazole Derivative (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Saher A Shaikh, B Jayaram
A Swift All-Atom Energy Based Computational Protocol To Predict Dna-Drug Binding Affinity And Deltatm
To Be Published 2006
PubMed: search
(for further references see the PDB file header)

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 1)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

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Chain A from PDB  Type:DNA  Length:12
                                           
                  2gy4 A  1 CGCGAATTCGCG 12
                                    10

Chain B from PDB  Type:DNA  Length:12
                                           
                  2gy4 B 13 CGCGAATTCGCG 24
                                    22

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Classification and Annotation

SCOP Domains (0, 0)

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Gene Ontology (0, 0)

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