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(-) Description

Title :  D-AMINO ACID OXIDASE [NOCARDIOIDES SP. JS614]
 
Authors :  P. Bhattacharya, T. Ganeshan
Date :  06 Oct 06  (Deposition) - 24 Oct 06  (Release) - 24 Oct 06  (Revision)
Method :  THEORETICAL MODEL
Resolution :  NOT APPLICABLE
Chains :  Theor. Model :  _
Keywords :  D-Amino Acid Oxidase [Nocardioides Sp. Js614] (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Bhattacharya, T. Ganeshan

PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - D-AMINO ACID OXIDASE [NOCARDIOIDES SP. JS614]
    Chains: _
    EC Number: 1.4.3.3.
    Fragment: D-AMINO ACID OXIDASE [NOCARDIOIDES SP. JS614]
    Mutation: YES
    Organism Scientific: D-AMINO ACID OXIDASE [NOCARDIOIDES SP. JS614].
    Other Details: D-AMINO ACID OXIDASE [NOCARDIOIDES SP. JS614]
    Strain: D-AMINO ACID OXIDASE [NOCARDIOIDES SP. JS614]

 Structural Features

(-) Chains, Units

  
Theoretical Model : 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2E0F)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2E0F)

(-) Cis Peptide Bonds  (1, 1)

Theoretical Model
No.Residues
1Gly  :218 -Gly  :219

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Theoretical Model
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain _ from PDB  Type:PROTEIN  Length:299
                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..hhhhhhhhhhhhhhh.eeeeee.........................hhhhhhhhhhhhhhhhh........eeeeeeeeee..........................eeeeeeeee.hhhhhhhhhhhhhhhhh.eeee...........eeee.hhhhhhh.......eeeeeeeeee.......eeee....eeeee....eeee...ee.......hhhhhhhhhhhhhhhh.......eeeeeeeeeeeeeeeeeeee..eeeeeee...hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2e0f _   3 DRVIVVGAGVIGLTCAVRLLQAGHRVDVVARDLPLETTSAVAGAFWYPYRALPQDRVAAWSATSYAVFDALADTDPESGVRMVAGTEVFMAPEPDPWWGAAVPGLTRTRDVPPGWVDGWTFTTPVVDTGVYLAWLAGRVEQLGGTITRLNLSALPSGPGLVVNCAGLGARLLGADRTVVPVRGQVVVVEQTGIDRWWLDRSGPTYVVPREHDVVVGGTDVEGEWSRTPSPATAEAILERATRLVPGLRGARVLRHRVGLRPVRPAVRLDRVGDVVHCYGARRRRGHPELGCGRRGGRAG 301
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2E0F)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2E0F)

(-) Gene Ontology  (0, 0)

Theoretical Model(hide GO term definitions)
    (no "Gene Ontology" information available for 2E0F)

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  Sites
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  Cis Peptide Bonds
    Gly  :218 - Gly  :219   [ RasMol ]  
 

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  2e0f
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 Related Entries

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