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(-) Description

Title :  CRYSTAL STRUCTURE OF PROTEIN OF UNKNOWN FUNCTION ATU1913 FROM AGROBACTERIUM TUMEFACIENS STR. C58
 
Authors :  B. Nocek, T. Skarina, A. Edwards, A. Savchenko, A. Joachimiak, Midwest For Structural Genomics (Mcsg)
Date :  16 Sep 05  (Deposition) - 01 Nov 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Hypothetical Protein, New Fold, Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Nocek, T. Skarina, A. Savchenko, A. Edwards, A. Joachimiak
Crystal Structure Of Hypothetical Protein From Agrobacteriu Tumefaciens Reveals A New Fold.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN ATU1913
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Organism Scientific: AGROBACTERIUM TUMEFACIENS STR.
    Organism Taxid: 176299
    Strain: C58

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 6)

Asymmetric Unit (2, 6)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
2SO43Ligand/IonSULFATE ION
Biological Unit 1 (2, 12)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
2SO46Ligand/IonSULFATE ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:32 , GLY A:53 , GLY A:54 , VAL A:55 , ALA A:56 , ILE A:61BINDING SITE FOR RESIDUE SO4 A 202
2AC2SOFTWAREARG A:7 , GLY A:82 , LEU A:83 , LYS A:102BINDING SITE FOR RESIDUE SO4 A 203
3AC3SOFTWAREALA A:38 , ARG A:42 , HOH A:243 , HOH A:254BINDING SITE FOR RESIDUE SO4 A 204

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Ser A:59 -Pro A:60

 Sequence-Structure Mapping

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(-) Sequences/Alignments

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Chain A from PDB  Type:PROTEIN  Length:101
 aligned with A9CIG4_AGRFC | A9CIG4 from UniProtKB/TrEMBL  Length:104

    Alignment length:101
                                    13        23        33        43        53        63        73        83        93       103 
         A9CIG4_AGRFC     4 PNFRYTHYDLKELRAGTTLEISLSSVNNVRLMTGANFQRFTELLDFKYLGGVAKKSPIRIAVPETMHWHLIIDAEGHSGLAESSVKMLPAQPQATLTRKAS 104
               SCOP domains d2b1ya1 A:4-104 Hypothetical protein Atu1913                                                          SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................................hhhhhhhhhhhh......................................................... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------- Transcript
                 2b1y A   4 PNFRYTHYDLKELRAGTTLEISLSSVNNVRLmTGANFQRFTELLDFKYLGGVAKKSPIRIAVPETmHWHLIIDAEGHSGLAESSVKmLPAQPQATLTRKAS 104
                                    13        23        33 |      43        53        63     |  73        83      | 93       103 
                                                          35-MSE                            69-MSE               90-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

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