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(-) Description

Title :  CYSTEIN KNOT WITH 2FP INTEGRIN AVB6 CANCER RECOGNITION SITE
 
Authors :  F. V. Filipp, R. Kimura, S. Tikole
Date :  10 Oct 15  (Deposition) - 02 Nov 16  (Release) - 02 Nov 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Cancer, Imaging, Protein Binding, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. V. Filipp, R. Kimura, S. Tikole
Cystein Knot With 2-Fp Label And Integrin Avb6 Cancer Recognition Site
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CYSTEINE KNOT
    Chains: A
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
14LT1Mod. Amino Acid(2R)-2-FLUOROPROPANOIC ACID
NMR Structure * (1, 1)
No.NameCountTypeFull Name
14LT1Mod. Amino Acid(2R)-2-FLUOROPROPANOIC ACID

(-) Sites  (0, 0)

(no "Site" information available for 2N8C)

(-) SS Bonds  (3, 3)

NMR Structure
No.Residues
1A:3 -A:28
2A:18 -A:30
3A:24 -A:28

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2N8C)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2N8C)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2N8C)

(-) Exons   (0, 0)

(no "Exon" information available for 2N8C)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:37
                                                                    
               SCOP domains ------------------------------------- SCOP domains
               CATH domains ------------------------------------- CATH domains
               Pfam domains ------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhh...hhhhh....eee...eee Sec.struct. author
                 SAPs(SNPs) ------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------- PROSITE
                 Transcript ------------------------------------- Transcript
                  2n8c A  1 xGCILNGRTDLGTLLFRCRRDSDCPGACICRGNGYCG 37
                            |       10        20        30       
                            |                                    
                            1-4LT
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2N8C)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2N8C)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2N8C)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 2N8C)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 2N8C)

(-) Related Entries Specified in the PDB File

1ha9
2n8b RELATED ID: 25845 RELATED DB: BMRB