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(-) Description

Title :  THE HIGH RESOLUTION CRYSTAL STRUCTURE OF THE DNA DECAMER D(AGGCATGCCT)
 
Authors :  C. M. Nunn, S. Neidle
Date :  05 Sep 95  (Deposition) - 22 Mar 96  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.30
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  A-Dna, Double Helix, Flipped-Out Bases (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. M. Nunn, S. Neidle
The High Resolution Crystal Structure Of The Dna Decamer D(Aggcatgcct).
J. Mol. Biol. V. 256 340 1996
PubMed-ID: 8594201  |  Reference-DOI: 10.1006/JMBI.1996.0090
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - DNA (5'-D(*AP*GP*GP*CP*AP*TP*GP*CP*CP*T)-3')
    Chains: A
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1NCO2Ligand/IonCOBALT HEXAMMINE(III)
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1NCO4Ligand/IonCOBALT HEXAMMINE(III)

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREDA A:1 , DG A:2 , DG A:3 , DC A:4 , DG A:7 , HOH A:19 , HOH A:24 , HOH A:25 , HOH A:33 , HOH A:51 , HOH A:66BINDING SITE FOR RESIDUE NCO A 11
2AC2SOFTWAREDG A:3 , DG A:7 , DC A:8 , DC A:9 , DT A:10 , HOH A:23 , HOH A:34 , HOH A:39 , HOH A:42 , HOH A:46 , HOH A:49 , HOH A:56 , HOH A:58BINDING SITE FOR RESIDUE NCO A 12

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 232D)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 232D)

 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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Chain A from PDB  Type:DNA  Length:10
                                         
                  232d A  1 AGGCATGCCT 10
                                    10
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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  232d
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 Related Entries

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