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(-) Description

Title :  NMR SOLUTION STRUCTURES OF A DNA DODECAMER CONTAINING A TANDEM GT MISMATCHES USING NOE AND RESIDUAL DIPOLAR COUPLINGS
 
Authors :  F. Alvarez-Salgado, H. Desvaux, Y. Boulard
Date :  26 Apr 05  (Deposition) - 01 Aug 06  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B
Keywords :  Nmr, Rdc, Deoxyribonucleic Acid, Liquid Crystal, Tandem Gt Mismatches, Dna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Alvarez-Salgado, H. Desvaux, Y. Boulard
Nmr Assessment Of The Global Shape Of A Non-Labelled Dna Dodecamer Containing A Tandem Of G--T Mismatches
Magn. Reson. Chem. V. 44 1081 2006
PubMed-ID: 16972306  |  Reference-DOI: 10.1002/MRC.1902
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 5'-D(*GP*AP*CP*TP*GP*TP*GP*CP*AP*GP*TP*C)-3'
    Chains: A, B
    Engineered: YES
    Synthetic: YES

 Structural Features

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NMR Structure : 

Summary Information (see also Sequences/Alignments below)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:DNA  Length:12
                                           
                  1x30 A  1 GACTGTGCAGTC 12
                                    10  


Chain B from PDB  Type:DNA  Length:12
                                           
                  1x30 B 13 GACTGTGCAGTC 24
                                    22
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

1x2o RDCS WERE MEASURED IN BICELLES SDS SOLUTION
1x2s RDCS WERE MEASURED IN PF1 SOLUTION
1x2u RDCS WERE MEASURED IN PEG SOLUTION
1x2v THIS STRUCTURE IS THE WILD DNA SEQUENCE (WITHOUT MISMATCH) THAT SERVES AS REFERENCE
1x2x RDCS WERE MEASURED IN BICELLES SDS SOLUTION, A TANDEM GT MISMATCHES
1x2y RDCS WERE MEASURED IN PF1 SOLUTION, A TANDEM GT MISMATCHES
1x2z RDCS WERE MEASURED IN PEG SOLUTION, A TANDEM GT MISMATCHES