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(-) Description

Title :  SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM LOOP (ISL) RNA AT PH 5.7
 
Authors :  N. J. Reiter, H. Blad, F. Abildgaard, S. E. Butcher
Date :  02 Apr 04  (Deposition) - 09 Nov 04  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (14x)
Keywords :  Rna, Stem-Loop, Gnra-Like Tetratloop, A-C Wobble Pair, Internal Loop (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  N. J. Reiter, H. Blad, F. Abildgaard, S. E. Butcher
Dynamics In The U6 Rna Intramolecular Stem-Loop: A Base Flipping Conformational Change.
Biochemistry V. 43 13739 2004
PubMed-ID: 15504036  |  Reference-DOI: 10.1021/BI048815Y
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - U6 INTRAMOLECULAR STEM-LOOP RNA
    ChainsA
    EngineeredYES
    MutationYES
    Other DetailsIN VITRO T7 RNA POLYMERASE TRANSCRIPTION. THE SEQUENCE IS FROM SACCHAROMYCES CEREVISIAE.
    SyntheticYES

 Structural Features

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NMR Structure (14x)

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NMR Structure
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Chain A from PDB  Type:RNA  Length:24
                                                       
                  1syz A  1 GGUUCCCCUGCAUAAGGAUGAACC 24
                                    10        20    

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(-) Related Entries Specified in the PDB File

1lc6 SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM LOOP (ISL) RNA AT PH 7.0
1nc0 SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM LOOP (ISL) RNA CONTAINING A U80G MUTATION
1nz1 SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM-LOOP CONTAINING AN SP PHOSPHOROTHIOATE AT NUCLEOTIDE U80
1sy4 REFINED SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM LOOP (ISL) RNA USING RESIDUAL DIPOLAR AT PH 7.0
1sy5 SOLUTION STRUCTURE OF THE S. CEREVISIAE U6 INTRAMOLECULAR STEM LOOP (ISL) RNA USING RESIDUAL DIPOLAR AT PH 6.0