1SP6 - JenaLib

Title :   A DNA DUPLEX CONTAINING A CHOLESTEROL ADDUCT (ALPHA-ANOMER)

Authors :   I. Gomez-Pinto, E. Cubero, S. G. Kalko, V. Monaco, G. Van Der Marel, J. Boom, M. Orozco, C. Gonzalez

Date :   16 Mar 04 (Deposition) - 01 Jun 04 (Release) - 13 Jul 11 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A,B  (10x)
NMR Structure *: A,B  (1x)

Keywords :   Double Helix, Modified Dna, Cholesterol Adduct, Dna Lesion, Dna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   I. Gomez-Pinto, E. Cubero, S. G. Kalko, V. Monaco, G. Van Der Marel, J. H. Van Boom, M. Orozco, C. Gonzalez
Effect Of Bulky Lesions On Dna: Solution Structure Of A Dna Duplex Containing A Cholesterol Adduct.
J. Biol. Chem. V. 279 24552 2004
PubMed-ID: 15047709 | Reference-DOI: 10.1074/JBC.M311751200

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 1)

NMR Structure (1, 1)

No.	Name	Count	Type	Full Name
1	HOL	1	Mod. Nucleotide	ALPHA-CHOLEST-5-EN-3-YL 3-[(2-DEOXY-5-O-PHOSPHONO-ALPHA-D-GLYCERO-PENTOFURANOSYL)OXY]PROPYLCARBAMATE

NMR Structure * (1, 1)

No.	Name	Count	Type	Full Name
1	HOL	1	Mod. Nucleotide	ALPHA-CHOLEST-5-EN-3-YL 3-[(2-DEOXY-5-O-PHOSPHONO-ALPHA-D-GLYCERO-PENTOFURANOSYL)OXY]PROPYLCARBAMATE

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SS Bonds (0, 0)

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Exons (0, 0)

Sequences/Alignments

NMR Structure

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Chain A from PDB  Type:DNA  Length:10
                                         
                  1sp6 A  1 CCACxGGAAC 10
                                |   10
                                |     
                                5-HOL

Chain B from PDB  Type:DNA  Length:10
                                         
                  1sp6 B 11 GTTCCGGTGG 20
                                    20

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Gene Ontology (0, 0)

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