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(-) Description

Title :  ROLE OF THE AMINO SUGAR IN DNA BINDING OF DISACCHARIDE ANTHRACYCLINES: CRYSTAL STRUCTURE OF MAR70/D(CGATCG) COMPLEX
 
Authors :  C. Temperini, M. Cirilli, M. Aschi, G. Ughetto
Date :  15 Oct 03  (Deposition) - 22 Feb 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.20
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Right Handed Dna, Double Helix, Drug-Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Temperini, M. Cirilli, M. Aschi, G. Ughetto
Role Of The Amino Sugar In Dna Binding Of Disaccharide Anthracyclines: Crystal Structure Of The Complex Mar70/D(Cgatcg).
Bioorg. Med. Chem. V. 13 1673 2005
PubMed-ID: 15698785  |  Reference-DOI: 10.1016/J.BMC.2004.12.007
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 5'-D(*CP*GP*AP*TP*CP*G)-3'
    Chains: A
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1MAR1Ligand/Ion4'-EPI-4'-(2-DEOXYFUCOSE)DAUNOMYCIN
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1MAR2Ligand/Ion4'-EPI-4'-(2-DEOXYFUCOSE)DAUNOMYCIN

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREDC A:1 , DG A:2 , DA A:3 , DT A:4 , DC A:5 , DG A:6 , HOH A:2001 , HOH A:2002 , HOH A:2003 , HOH A:2009 , HOH A:2010BINDING SITE FOR RESIDUE MAR A 7

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1R68)

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(-) Sequences/Alignments

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Chain A from PDB  Type:DNA  Length:6
                                    
                   1r68 A 1 CGATCG 6
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 Classification and Annotation

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  1r68
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