1QWB - JenaLib

Title :   NMR STRUCUTRE OF 5'-R(GGACACGAAAUCCCGAAGUAGUGUCC)-3' : AN RNA HAIRPIN CONTAINING THE IN VITRO SELECTED CONSENSUS SEQUENCE FOR NUCLEOLIN RBD12

Authors :   L. D. Finger, L. Trantirek, C. Johansson, J. Feigon

Date :   01 Sep 03 (Deposition) - 25 Nov 03 (Release) - 24 Feb 09 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A  (17x)

Keywords :   A-Form Helix, Loop E Motif, S-Turn, Disordered Hairpin Loop, Rna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   L. D. Finger, L. Trantirek, C. Johansson, J. Feigon
Solution Structures Of Stem-Loop Rnas That Bind The Two N-Terminal Rna-Binding Domains Of Nucleolin
Nucleic Acids Res. V. 31 6461 2003
PubMed-ID: 14602904 | Reference-DOI: 10.1093/NAR/GKG866
(for further references see the PDB file header)

Compounds

Molecule 1 - SNRE26
	Chains	:	A
	Engineered	:	YES
	Other Details	:	RNA CONTAINS THE CONSENSUS SEQUENCE FOR THE IN VITRO SELECTED NRE.
	Other Details - Source	:	RNA WAS PREPARED BY IN VITRO TRANSCRIPTION WITH T7 RNA POLYMERASE
	Synthetic	:	YES

Structural Features

Chains, Units

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Exons (0, 0)

Sequences/Alignments

NMR Structure

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Chain A from PDB  Type:RNA  Length:26
                                                         
                  1qwb A  1 GGACACGAAAUCCCGAAGUAGUGUCC 26
                                    10        20

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Classification and Annotation

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File

1ie1	NMR SOLUTION STRUCTURE OF AN IN VITRO SELECTED RNA WHICH IS SEQUENCE SPECIFICALLY RECOGNIZED BY HAMSTER NUCLEOLIN RBD12.
1ie2	SOLUTION STRUCTURE OF AN IN VITRO SELECTED RNA WHICH IS SEQUENCE SPECIFICALLY RECOGNIZED BY RBD12 OF HAMSTER NUCLEOLIN. SNRE (ANTI)
1qwa	NMR STRUCTURE OF 5'-R(GGAUGCCUCCCGAGUGCAUCC): AN RNA HAIRPIN DERIVED FROM THE MOUSE 5'ETS THAT BINDS NUCLEOLIN RBD12.

Description