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(-) Description

Title :  [3.2.0]BCANA:DNA
 
Authors :  H. V. Tommerholt, N. K. Christensen, P. Nielsen, J. Wengel, P. C. Stein, J. P. Jacobsen, M. Petersen
Date :  07 Feb 03  (Deposition) - 14 Jul 03  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (40x)
Keywords :  Deoxyribonucleic Acid, Arabino Nucleic Acid, Dna, Nmr, Rnase H (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. V. Tommerholt, N. K. Christensen, P. Nielsen, J. Wengel, P. C. Stein, J. P. Jacobsen, M. Petersen
Nmr Solution Structure Of A Dsdna Containing A Bicyclic D-Arabino-Configured Nucleotide Fixed In An O4'-Endo Sugar Conformation
Org. Biomol. Chem. V. 1 1790 2003
PubMed-ID: 12926371  |  Reference-DOI: 10.1039/B300848G

(-) Compounds

Molecule 1 - 5'-D(*CP*TP*GP*A TLBP*AP*TP*GP*CP)-3'
    Chains: A
    Other Details: DSDNA WITH A SINGLE [3.2.0]BCANA (BICYCLIC ARABINO NUCLEOTIDE) MODIFICATION INCORPORATED
    Synonym: [3.2.0]BCANA:DNA
    Synthetic: YES
 
Molecule 2 - 5'-D(*GP*CP*AP*TP*AP*TP*CP*AP*GP)-3'
    Chains: B
    Other Details: DSDNA WITH A SINGLE [3.2.0]BCANA (BICYCLIC ARABINO NUCLEOTIDE) MODIFICATION INCORPORATED
    Synthetic: YES

 Structural Features

(-) Chains, Units

  
NMR Structure (40x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1TLB1Mod. Nucleotide2'-O,3'-C-METHYLENE-ARABINOFURANOSYL-THYMINE-5'-MONOPHOSPHATE

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:DNA/RNA  Length:9
                                        
                  1oci A  1 CTGAtATGC  9
                                |    
                                |    
                                5-TLB


Chain B from PDB  Type:DNA  Length:9
                                        
                  1oci B 10 GCATATCAG 18
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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NMR Structure(hide GO term definitions)
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