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Title :   SOLUTION STRUCTURE OF AN RNA 2'-O-METHYLATED RNA DUPLEX CONTAINING AN RNA/DNA HYBRID SEGMENT AT THE CENTER, NMR, MINIMIZED AVERAGE STRUCTURE

Authors :   T. Nishizaki, S. Iwai, E. Ohtsuka, H. Nakamura

Date :   29 Mar 96 (Deposition) - 27 Jan 97 (Release) - 24 Feb 09 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A,B

Keywords :   Dna/Rna Duplex, Dna-Rna Hybrid (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   T. Nishizaki, S. Iwai, E. Ohtsuka, H. Nakamura
Solution Structure Of An Rna. 2'-O-Methylated Rna Hybrid Duplex Containing An Rna. Dna Hybrid Segment At The Center.
Biochemistry V. 36 2577 1997
PubMed-ID: 9054564 | Reference-DOI: 10.1021/BI962297C
(for further references see the PDB file header)

Compounds

*Molecule 1 - RNA (5'-R(GPGPAPGPAPUPGPAPC)-3')**
	Chains	:	A
	Engineered	:	YES
	Other Details	:	A SUBSTRATE OF RNASE H
	Synthetic	:	YES

*Molecule 2 - DNA/RNA (5'-R(OMGPOMUPOMC)-D(PAPTPCPT)- R(POMCPOMC)-3')**
	Chains	:	B
	Engineered	:	YES
	Other Details	:	A SUBSTRATE OF RNASE H
	Synthetic	:	YES

Structural Features

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Ligands, Modified Residues, Ions (3, 5)

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Sequences/Alignments

NMR Structure

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Chain A from PDB  Type:RNA  Length:9
                                        
                  1nao A  1 GGAGAUGAC  9

Chain B from PDB  Type:DNA/RNA  Length:9
                                        
                  1nao B 10 gucATCTcc 18
                            |||    ||
                           10-OMG  ||
                            11-OMU ||
                             12-OMC||
                                  17-OMC
                                   18-OMC

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